Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_B10
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005182-1|AAH05182.1|  253|Homo sapiens UTP11-like, U3 small nu...   140   4e-33
AL603790-7|CAH69932.1|  253|Homo sapiens UTP11-like, U3 small nu...   140   4e-33
AF151852-1|AAD34089.1|  253|Homo sapiens CGI-94 protein protein.      139   9e-33
AF067802-1|AAF75562.1|  184|Homo sapiens HDCMB12P protein.             95   3e-19

>BC005182-1|AAH05182.1|  253|Homo sapiens UTP11-like, U3 small
           nucleolar ribonucleoprotein, (yeast) protein.
          Length = 253

 Score =  140 bits (339), Expect = 4e-33
 Identities = 71/164 (43%), Positives = 95/164 (57%), Gaps = 1/164 (0%)
 Frame = +3

Query: 153 QKTHRERHQPEARKHLGLLEXXXXXXXXXXXXHEKGQXXXXXXXXXXDKNPDEFYYHMIN 332
           Q+ HRER QP  RKHLGLLE             +K +          +KNPDEFYY M  
Sbjct: 13  QREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query: 333 SRVKEGVHHELQKEGEHSSEQVKLMQTQDIKYINMKRTIESRRINRLQSQLHMTDVAEAT 512
            ++++GVH   + + E + EQ+KLM+TQD+KYI MKR  E+++I RL+S+LH+ D     
Sbjct: 73  VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 513 PNTHTFFVD-EGEKNGFDLAKRLDTHPALIGRKSNRPRLSDLDK 641
            N H FF D + E   FD+A  L T P L+ R  NRPR+  L K
Sbjct: 133 QNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQK 176


>AL603790-7|CAH69932.1|  253|Homo sapiens UTP11-like, U3 small
           nucleolar ribonucleoprotein,e protein.
          Length = 253

 Score =  140 bits (339), Expect = 4e-33
 Identities = 71/164 (43%), Positives = 95/164 (57%), Gaps = 1/164 (0%)
 Frame = +3

Query: 153 QKTHRERHQPEARKHLGLLEXXXXXXXXXXXXHEKGQXXXXXXXXXXDKNPDEFYYHMIN 332
           Q+ HRER QP  RKHLGLLE             +K +          +KNPDEFYY M  
Sbjct: 13  QREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query: 333 SRVKEGVHHELQKEGEHSSEQVKLMQTQDIKYINMKRTIESRRINRLQSQLHMTDVAEAT 512
            ++++GVH   + + E + EQ+KLM+TQD+KYI MKR  E+++I RL+S+LH+ D     
Sbjct: 73  VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 513 PNTHTFFVD-EGEKNGFDLAKRLDTHPALIGRKSNRPRLSDLDK 641
            N H FF D + E   FD+A  L T P L+ R  NRPR+  L K
Sbjct: 133 QNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQK 176


>AF151852-1|AAD34089.1|  253|Homo sapiens CGI-94 protein protein.
          Length = 253

 Score =  139 bits (336), Expect = 9e-33
 Identities = 70/164 (42%), Positives = 95/164 (57%), Gaps = 1/164 (0%)
 Frame = +3

Query: 153 QKTHRERHQPEARKHLGLLEXXXXXXXXXXXXHEKGQXXXXXXXXXXDKNPDEFYYHMIN 332
           Q+ HRER +P  RKHLGLLE             +K +          +KNPDEFYY M  
Sbjct: 13  QREHRERSEPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query: 333 SRVKEGVHHELQKEGEHSSEQVKLMQTQDIKYINMKRTIESRRINRLQSQLHMTDVAEAT 512
            ++++GVH   + + E + EQ+KLM+TQD+KYI MKR  E+++I RL+S+LH+ D     
Sbjct: 73  VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 513 PNTHTFFVD-EGEKNGFDLAKRLDTHPALIGRKSNRPRLSDLDK 641
            N H FF D + E   FD+A  L T P L+ R  NRPR+  L K
Sbjct: 133 QNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQK 176


>AF067802-1|AAF75562.1|  184|Homo sapiens HDCMB12P protein.
          Length = 184

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
 Frame = +3

Query: 324 MINSRVKEGVHHELQKEGEHSSEQVKLMQTQDIKYINMKRTIESRRINRLQSQLHMTDVA 503
           M   ++++GVH   + + E + EQ+KLM+TQD+KYI MKR  E+++I RL+S+LH+ D  
Sbjct: 1   MTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQ 60

Query: 504 EATPNTHTFFVD-EGEKNGFDLAKRLDTHPALIGRKSNRPRLSDLDK 641
               N H FF D + E   FD+A  L T P L+ R  NRPR+  L K
Sbjct: 61  GKQQNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQK 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,591,767
Number of Sequences: 237096
Number of extensions: 1318270
Number of successful extensions: 6722
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6718
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)