Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_B08
(558 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 71 8e-13
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 71 8e-13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 69 4e-12
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 69 6e-12
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 69 6e-12
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 66 4e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 66 4e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 66 4e-11
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 65 5e-11
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 64 9e-11
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 63 2e-10
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 63 2e-10
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 63 2e-10
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 63 2e-10
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 63 2e-10
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 62 4e-10
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 61 1e-09
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 60 2e-09
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 58 6e-09
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 56 3e-08
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 56 3e-08
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 54 1e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 51 9e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 42 6e-04
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 36 0.028
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 31 0.80
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 71.3 bits (167), Expect = 8e-13
Identities = 54/173 (31%), Positives = 84/173 (48%)
Frame = +1
Query: 13 KCNKIILLFKSGSTFDPSNFXTHFSTILLNCR*H*VKFLKKIFWNNFRTISITITCFIKK 192
K II++ K+G T P++ ++ T LL K ++++ N T K
Sbjct: 495 KSASIIMIHKTGKT--PTDVDSYRPTSLLPSL---GKIMERLILNRLLTCKDVTKAIPKF 549
Query: 193 *YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIR 372
+GF H T + ++ L+A E A+G F D+ +AFD V H LL K
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPP 609
Query: 373 GVSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ L ++KS+L R V G +SS + GVPQGS+LG L+ V+ +D+P
Sbjct: 610 QLYL-VVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMP 661
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 71.3 bits (167), Expect = 8e-13
Identities = 42/112 (37%), Positives = 61/112 (54%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF +GHST + L K+ILQA ++ VF D+ +AFD V H+ L+ K+
Sbjct: 550 FGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWHDGLISKVKKL-FPA 608
Query: 376 VSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
++KSYL R V + S ++ GVPQGS+LG L+ V+ DLP
Sbjct: 609 PYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLP 660
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 68.9 bits (161), Expect = 4e-12
Identities = 53/173 (30%), Positives = 83/173 (47%)
Frame = +1
Query: 13 KCNKIILLFKSGSTFDPSNFXTHFSTILLNCR*H*VKFLKKIFWNNFRTISITITCFIKK 192
K II++ K+G T P++ ++ LL K ++++ N T K
Sbjct: 297 KSASIIMIHKTGKT--PTDVDSYRPISLLPSL---GKIMERLILNRLLTCKDVTKAIPKF 351
Query: 193 *YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIR 372
+GF H T + ++ L+A E A+G F D+ +AFD V H LL K
Sbjct: 352 QFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPP 411
Query: 373 GVSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ L ++KS+L R V G +SS + GVPQGS+LG L+ V+ +D+P
Sbjct: 412 QLYL-VVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMP 463
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 68.5 bits (160), Expect = 6e-12
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALG-VFCDLSKAFDFVEHNTLLRKLHHYGIR 372
YGF G +T ++ L +N ++ +S ++G V D+ AFD V H+ LL KL G
Sbjct: 574 YGFRNGLNTILPTLKL-RNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTP 632
Query: 373 GVSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLPK 534
+++++++L R V+ +S+ +LN GVPQGS+LG LF ++ +D+P+
Sbjct: 633 IYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQ 686
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 68.5 bits (160), Expect = 6e-12
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALG-VFCDLSKAFDFVEHNTLLRKLHHYGIR 372
YGF G +T ++ L +N ++ +S ++G V D+ AFD V H+ LL KL G
Sbjct: 522 YGFRNGLNTILPTLKL-RNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTP 580
Query: 373 GVSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLPK 534
+++++++L R V+ +S+ +LN GVPQGS+LG LF ++ +D+P+
Sbjct: 581 IYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQ 634
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 65.7 bits (153), Expect = 4e-11
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 KFLKKIFWNNFRTISITITCFIKK*YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFC 300
K L++I I +GF + H + + IL+A +E F
Sbjct: 125 KLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFL 184
Query: 301 DLSKAFDFVEHNTLLRKLHHYGIRGVSLELIKSYLFGRIQKVDFKGKRSSGV-LLNMGVP 477
D+++AFD V H+ LL KL I +L+++YL R V G+ +S + + GVP
Sbjct: 185 DITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVP 243
Query: 478 QGSILGQFLFLVYINDLP 531
QGSILG L+ +Y +D+P
Sbjct: 244 QGSILGPVLYSIYSSDMP 261
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.7 bits (153), Expect = 4e-11
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 KFLKKIFWNNFRTISITITCFIKK*YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFC 300
K L++I I +GF + H + + IL+A +E F
Sbjct: 572 KLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFL 631
Query: 301 DLSKAFDFVEHNTLLRKLHHYGIRGVSLELIKSYLFGRIQKVDFKGKRSSGV-LLNMGVP 477
D+++AFD V H+ LL KL I +L+++YL R V G+ +S + + GVP
Sbjct: 632 DITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVP 690
Query: 478 QGSILGQFLFLVYINDLP 531
QGSILG L+ +Y +D+P
Sbjct: 691 QGSILGPVLYSIYSSDMP 708
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.7 bits (153), Expect = 4e-11
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 KFLKKIFWNNFRTISITITCFIKK*YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFC 300
K L++I I +GF + H + + IL+A +E F
Sbjct: 572 KLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFL 631
Query: 301 DLSKAFDFVEHNTLLRKLHHYGIRGVSLELIKSYLFGRIQKVDFKGKRSSGV-LLNMGVP 477
D+++AFD V H+ LL KL I +L+++YL R V G+ +S + + GVP
Sbjct: 632 DITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVP 690
Query: 478 QGSILGQFLFLVYINDLP 531
QGSILG L+ +Y +D+P
Sbjct: 691 QGSILGPVLYSIYSSDMP 708
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.3 bits (152), Expect = 5e-11
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF + H + + IL+A +E F D+++AFD V H+ LL KL I
Sbjct: 597 FGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPR 655
Query: 376 VSLELIKSYLFGRIQKVDFKGKRSSGV-LLNMGVPQGSILGQFLFLVYINDLP 531
+L+++YL R V G+ +S + + GVPQGSILG L+ +Y +D+P
Sbjct: 656 YLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 64.5 bits (150), Expect = 9e-11
Identities = 39/113 (34%), Positives = 59/113 (52%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF GH T + +++ IL A + +F D+ +AFD V H L K+ +
Sbjct: 549 FGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVWHIGLQLKIKQT-LPA 607
Query: 376 VSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLPK 534
L+KSYL GR V F S+ + GVPQGS+LG L+ +Y +D+P+
Sbjct: 608 PYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQ 660
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF + H T + + IL+A E VF D+S+AFD V H LL KL
Sbjct: 478 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYN 537
Query: 376 VSLELIKSYLFGRIQKV-DFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ + +++SYL R +V D G+ S + GVPQGS LG L+ ++ +D+P
Sbjct: 538 LYI-ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 589
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF + H T + + IL+A E VF D+S+AFD V H LL KL
Sbjct: 594 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYN 653
Query: 376 VSLELIKSYLFGRIQKV-DFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ + +++SYL R +V D G+ S + GVPQGS LG L+ ++ +D+P
Sbjct: 654 LYI-ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 705
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF + H T + + IL+A E VF D+S+AFD V H LL KL
Sbjct: 594 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYN 653
Query: 376 VSLELIKSYLFGRIQKV-DFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ + +++SYL R +V D G+ S + GVPQGS LG L+ ++ +D+P
Sbjct: 654 LYI-ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 705
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF + H T + + IL+A E VF D+S+AFD V H LL KL
Sbjct: 556 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYN 615
Query: 376 VSLELIKSYLFGRIQKV-DFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ + +++SYL R +V D G+ S + GVPQGS LG L+ ++ +D+P
Sbjct: 616 LYI-ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 667
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF + H T + + IL+A E VF D+S+AFD V H LL KL
Sbjct: 594 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYN 653
Query: 376 VSLELIKSYLFGRIQKV-DFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ + +++SYL R +V D G+ S + GVPQGS LG L+ ++ +D+P
Sbjct: 654 LYI-ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMP 705
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 62.5 bits (145), Expect = 4e-10
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF + H T + + IL+A E VF D+S+AFD V H LL KL
Sbjct: 606 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYN 665
Query: 376 VSLELIKSYLFGRIQKV-DFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ + +++SYL R +V D G+ S + GVPQGS LG L+ ++ +D+P
Sbjct: 666 LYI-ILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMP 717
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF + H + + + IL+A E VF D+S+AFD V H LL KL
Sbjct: 594 FGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYN 653
Query: 376 VSLELIKSYLFGRIQKV-DFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ + +++SYL R +V D G+ S + GVPQGS LG L+ ++ +D+P
Sbjct: 654 LYI-ILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMP 705
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/112 (33%), Positives = 57/112 (50%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF H T + + I A E VF D+S+AFD V + L+ K+ +
Sbjct: 547 FGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVWLDGLMFKIK-ISLPE 605
Query: 376 VSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ +L+KSYL+ R V S+ + GVPQGS+LG L+L+Y D+P
Sbjct: 606 STHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIP 657
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 58.4 bits (135), Expect = 6e-09
Identities = 35/112 (31%), Positives = 54/112 (48%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF H T + + I A E +F D+++AFD V + LL K+ +
Sbjct: 545 FGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKLLPQN 604
Query: 376 VSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+L+KSYL+ R+ + S + GVPQGS+LG L+ +Y D P
Sbjct: 605 TH-KLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFP 655
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 78 PFQYNFTQL*VTLSKIFEKNILEQLSNHFNYNNLL 182
P Y L LSK+FEK +L ++S H NN L
Sbjct: 506 PSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTL 540
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/112 (30%), Positives = 53/112 (47%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF H T + + I A E +F D+++AFD V + LL K+ +
Sbjct: 545 FGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKLLPQN 604
Query: 376 VSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+L+KSYL+ + + S + GVPQGS+LG L+ +Y D P
Sbjct: 605 TH-KLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFP 655
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 78 PFQYNFTQL*VTLSKIFEKNILEQLSNHFNYNNLL 182
P Y L LSK+FEK +L ++S H NN L
Sbjct: 506 PSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTL 540
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 56.0 bits (129), Expect = 3e-08
Identities = 36/117 (30%), Positives = 58/117 (49%)
Frame = +1
Query: 202 FTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRGVS 381
F HST DA + + A ++ + D +AFD V + +L +L +GI
Sbjct: 551 FKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAFDRVGIHAVLCRLERWGIGPRL 610
Query: 382 LELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLPKFIETRH 552
LIK+++ R +V S+ +L+ G+PQGS L LF++ I D+ + TRH
Sbjct: 611 YNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIV-TRH 666
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/112 (30%), Positives = 54/112 (48%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+ F H + + I A E +F D+++AFD V + L+ K+ +
Sbjct: 86 FDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRVWLDGLMFKIIQLLPQN 145
Query: 376 VSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLP 531
+ +L+KSYL R+ V SS + GVPQGS+LG L+ +Y D+P
Sbjct: 146 IH-KLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIP 196
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 51.2 bits (117), Expect = 9e-07
Identities = 37/117 (31%), Positives = 60/117 (51%)
Frame = +1
Query: 190 K*YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGI 369
K +GF +G ST+D L + L + H +L V D S+AFD V ++++++L +
Sbjct: 542 KQFGFKKGKSTSDCL--LYVDYLITKSKMHTSL-VTLDFSRAFDRVGVHSIIQQLQEWKT 598
Query: 370 RGVSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDLPKFI 540
++ IK+++ R V SS + L G+PQGS + LFL+ N L I
Sbjct: 599 GPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKLSNII 655
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 41.9 bits (94), Expect = 6e-04
Identities = 35/111 (31%), Positives = 54/111 (48%)
Frame = +1
Query: 196 YGFTRGHSTTDASVDLIKNILQA*EESHNALGVFCDLSKAFDFVEHNTLLRKLHHYGIRG 375
+GF +G DA +K+ + A + LG F D AFD VE + L +L G R
Sbjct: 545 FGFRQGRCVEDAWRH-VKSSVGA-SAAQYVLGTFVDFKGAFDNVEWSAALSRLADLGCR- 601
Query: 376 VSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQGSILGQFLFLVYINDL 528
+ L +S+ GR + V + V + G PQGSI G F++ + ++ L
Sbjct: 602 -EMGLWQSFFSGR-RAVIRSSSGTVEVPVTRGCPQGSISGPFIWDILMDVL 650
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 36.3 bits (80), Expect = 0.028
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Frame = +1
Query: 121 KFLKKIFWNNFRTISITITCFIKK*YGFTRGHSTTDASVDLIKNILQA*EESHNALGV-- 294
K ++I + I+ + T + YGF +G ST DA + +A + + G
Sbjct: 490 KLFERILYARIELITESPTGLQGQQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKK 549
Query: 295 FC-----DLSKAFDFVEHNTLLRKLHHYGIRGVSLELIKSYLFGRIQ-KVDFKGKRSSGV 456
+C D+ AF+ +L + + G+ +I +Y R+ V G RS V
Sbjct: 550 YCAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSHQV 609
Query: 457 LLNMGVPQGSILGQFLF 507
+ GVPQGS+LG L+
Sbjct: 610 --SAGVPQGSVLGPILW 624
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 31.5 bits (68), Expect = 0.80
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 301 DLSKAFDFVEHNTLLRKLHHYGIRGVSLELIKSYLFGRIQKVDFKGKRSSGVLLNMGVPQ 480
D+SKAFD + H ++ L YG ++ +++ G ++ G S + GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 481 GSILGQFLFLVYINDL 528
G L LF + ++ L
Sbjct: 542 GDPLSPILFNLVMDRL 557
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,066,248
Number of Sequences: 53049
Number of extensions: 418006
Number of successful extensions: 962
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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