Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_B01
         (397 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p pro...    64   8e-11
AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA...    64   8e-11
AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-P...    59   2e-09
BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p pro...    34   0.059
BT011094-1|AAR82760.1|  870|Drosophila melanogaster RE31380p pro...    27   9.0  
AE014298-1092|AAF46300.3|  763|Drosophila melanogaster CG1530-PA...    27   9.0  
AE013599-4028|AAM68331.1|  863|Drosophila melanogaster CG9380-PB...    27   9.0  

>AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p
           protein.
          Length = 65

 Score = 63.7 bits (148), Expect = 8e-11
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +3

Query: 135 QCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 230
           QCTQVKVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 22  QCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53



 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +2

Query: 71  MDKPNVLARVVKVLGRTGSQG 133
           MDKP V ARV+KVLGRTGSQG
Sbjct: 1   MDKPVVWARVMKVLGRTGSQG 21


>AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA
           protein.
          Length = 65

 Score = 63.7 bits (148), Expect = 8e-11
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +3

Query: 135 QCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 230
           QCTQVKVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 22  QCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53



 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +2

Query: 71  MDKPNVLARVVKVLGRTGSQG 133
           MDKP V ARV+KVLGRTGSQG
Sbjct: 1   MDKPVVWARVMKVLGRTGSQG 21


>AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-PA
           protein.
          Length = 64

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +3

Query: 135 QCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 230
           QCTQV+VEF+G+ SRQIIRNVKGPVR GDIL+
Sbjct: 21  QCTQVRVEFLGDQSRQIIRNVKGPVRVGDILS 52



 Score = 33.9 bits (74), Expect = 0.079
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +2

Query: 71  MDKPNVLARVVKVLGRTGSQGPVYSSEGRVHW-GDQ 175
           MDKP   ARVV++LGRTGSQG    ++ RV + GDQ
Sbjct: 1   MDKPQY-ARVVEILGRTGSQG--QCTQVRVEFLGDQ 33


>BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p
           protein.
          Length = 73

 Score = 34.3 bits (75), Expect = 0.059
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 105 KCLAVLVLRXQCTQVKVEFIGETSRQIIRNVKGPVRDGDI 224
           K L  +  R   T+V+V+ + +   Q +R VKGPVR GD+
Sbjct: 11  KILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50


>BT011094-1|AAR82760.1|  870|Drosophila melanogaster RE31380p
           protein.
          Length = 870

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 52  LDITSQNG*TQRSCSCRESAWP 117
           L I SQNG T   C+ R  AWP
Sbjct: 745 LTIQSQNGGTYTICTSRTYAWP 766


>AE014298-1092|AAF46300.3|  763|Drosophila melanogaster CG1530-PA
           protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 125 NQYGQALSRHEQERWVYPFWLVISSLMQ*AHVHQSWRV 12
           N Y  A S  E E   YP W +IS L    H H + ++
Sbjct: 614 NSYYAAFSC-ELEASAYPMWSIISHLQDGTHAHLAKKI 650


>AE013599-4028|AAM68331.1|  863|Drosophila melanogaster CG9380-PB,
           isoform B protein.
          Length = 863

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 52  LDITSQNG*TQRSCSCRESAWP 117
           L I SQNG T   C+ R  AWP
Sbjct: 738 LTIQSQNGGTYTICTSRTYAWP 759


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,440,092
Number of Sequences: 53049
Number of extensions: 282822
Number of successful extensions: 847
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)