Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_A24
         (306 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0078 - 8074247-8074837,8075815-8076341,8076453-8077022,807...    27   3.8  
08_02_0043 - 11550185-11550418,11551525-11551568,11552134-115521...    27   3.8  
09_03_0046 + 11862923-11863112,11863225-11863406,11863522-118636...    26   5.1  
07_01_0222 - 1638965-1640965                                           26   5.1  
03_04_0004 + 16234648-16234731,16235178-16235237,16235598-162356...    26   5.1  
01_01_0727 - 5675215-5675277,5675523-5675621,5676645-5676782,567...    26   6.7  

>11_02_0078 -
           8074247-8074837,8075815-8076341,8076453-8077022,
           8077725-8077752
          Length = 571

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +1

Query: 7   NVVNEQLCRLCGSCSVRNHCL----IHSLYTLCKQLMYISAC 120
           N+V++    L G+    N CL    IH   + CK LM +S C
Sbjct: 31  NMVSQDPSILLGTTPQGNTCLHISSIHGRESFCKDLMVLSPC 72


>08_02_0043 -
           11550185-11550418,11551525-11551568,11552134-11552185,
           11552911-11553111,11553462-11553539,11553887-11554155,
           11554241-11554300,11554433-11554547,11554651-11554710,
           11554824-11555002,11555250-11555319,11555838-11555987,
           11556108-11556287,11556366-11556449
          Length = 591

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 7   NVVNEQLCRLCGSCSVRNHCLIHSLYTLCKQLMYISAC 120
           N  NE+LC +    S++N  L+    + CKQ   +SAC
Sbjct: 223 NQTNEELCSVLSLYSLQNIALV----SRCKQQHILSAC 256


>09_03_0046 +
           11862923-11863112,11863225-11863406,11863522-11863634,
           11863894-11864140,11864333-11864452,11864601-11864604,
           11864800-11864846,11864992-11865068,11865381-11865431,
           11865519-11865567,11865694-11865718,11866226-11866344
          Length = 407

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 31  RLCGSCSVRNHCLIHSLYTLCKQLMYI 111
           R  G  + R HCL+++ +T+ K +M++
Sbjct: 347 RKLGKSNQRKHCLLNAQFTMRKGMMHL 373


>07_01_0222 - 1638965-1640965
          Length = 666

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 31  RLCGSCSVRNHCLIHSLYTLCKQ 99
           RL G+C++   CL+  L  LC Q
Sbjct: 578 RLQGNCNINEACLVLKLGLLCSQ 600


>03_04_0004 +
           16234648-16234731,16235178-16235237,16235598-16235627,
           16235859-16235909,16235978-16236076,16236410-16236469,
           16236534-16236623,16237011-16237112,16237195-16237305,
           16237952-16238068,16238153-16238233,16239089-16239169,
           16239798-16239875,16239949-16240088,16240205-16240304,
           16240836-16240954,16241152-16241287,16241371-16241501,
           16242222-16242298,16242451-16242562,16242638-16242693,
           16243724-16243839,16245538-16245622,16245703-16245806,
           16246469-16246597,16246888-16246938
          Length = 799

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 22  QLCRLCGSCSVRNHCLIHSLYTLCK 96
           Q+CR CG     NH L  S  ++CK
Sbjct: 740 QVCRKCGLLGYYNHKLKASYCSMCK 764


>01_01_0727 -
           5675215-5675277,5675523-5675621,5676645-5676782,
           5676878-5676995,5678177-5678520
          Length = 253

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 22  QLCRLCGSCSVRNHC 66
           Q  ++CGSC +RN C
Sbjct: 151 QEAKICGSCKMRNSC 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,949,669
Number of Sequences: 37544
Number of extensions: 59574
Number of successful extensions: 105
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)