Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_A24
         (306 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              26   0.091
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    26   0.091
AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    21   3.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   4.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   7.9  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 26.2 bits (55), Expect = 0.091
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 152 FLH*IKIILRISIYSNKSVSEV 217
           F+H I +IL I IYSN+++++V
Sbjct: 9   FIHSIFLILIIFIYSNETIAQV 30


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 26.2 bits (55), Expect = 0.091
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 152 FLH*IKIILRISIYSNKSVSEV 217
           F+H I +IL I IYSN+++++V
Sbjct: 9   FIHSIFLILIIFIYSNETIAQV 30


>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 30

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 25 LCRLCGSCSVRNHCLIHS 78
          LCR+CG  +   H  +HS
Sbjct: 8  LCRVCGDKASGFHYGVHS 25


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 25  LCRLCGSCSVRNHCLIHS 78
           LCR+CG  +   H  +HS
Sbjct: 66  LCRVCGDKASGFHYGVHS 83


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 37  CGSCSVRNHCLIHSLYTLCKQLMYISACS 123
           C +C +     IH+       L  I ACS
Sbjct: 543 CVACGLHRDTYIHAQQIAWMALKMIQACS 571


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 141 FICIFYIKLKSFYEFQFIATKVYQK 215
           F    Y  L SFY   F+  +VY K
Sbjct: 200 FFYQIYATLGSFYIPLFVMIQVYYK 224


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,596
Number of Sequences: 438
Number of extensions: 662
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)