Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_P23
(623 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 156 1e-38
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 153 1e-37
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.11
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.14
05_07_0234 - 28566846-28567766 30 1.7
03_05_0366 - 23505755-23506441 29 2.3
04_01_0588 + 7657510-7657992,7658397-7658843 29 4.0
03_05_0452 + 24464134-24464442 29 4.0
02_04_0457 + 23093020-23093343,23093798-23093806 29 4.0
10_07_0029 + 12031711-12032464,12044289-12044386 28 5.2
07_01_0469 - 3552409-3553368 28 6.9
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 6.9
05_05_0285 - 23855219-23855371,23855391-23856063,23856239-238563... 28 6.9
04_01_0244 - 3194141-3195091,3195301-3195312 28 6.9
03_01_0092 - 731069-731434,731569-733080 28 6.9
11_01_0411 - 3114959-3115000,3115504-3116703 27 9.2
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 27 9.2
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 27 9.2
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 156 bits (379), Expect = 1e-38
Identities = 73/118 (61%), Positives = 80/118 (67%)
Frame = +2
Query: 137 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 316
D+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGN
Sbjct: 39 DVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 98
Query: 317 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPL 490
MCRGGRMFAPTK WR+WH ARGH IE +PELPL
Sbjct: 99 MCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIETVPELPL 156
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 465 LKRFPSFPWVVADKVQEINKXKQAVIFLXRLKAWSDILKVYKSQRLRAGKGKM 623
++ P P V++D + I K QA+ L ++ A++D K S +R GKGKM
Sbjct: 148 IETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKM 200
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 153 bits (371), Expect = 1e-37
Identities = 72/118 (61%), Positives = 78/118 (66%)
Frame = +2
Query: 137 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 316
D+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGN
Sbjct: 38 DVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 97
Query: 317 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPL 490
MCRGGRMFAPTK WRRWH ARGH IE +PE PL
Sbjct: 98 MCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEGVPEFPL 155
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +3
Query: 414 PLLLLASQRSFRLEDTLLKRFPSFPWVVADKVQEINKXKQAVIFLXRLKAWSDILKVYKS 593
P L+LA R R+E P FP VV+D ++ I K Q++ L ++ A++D K S
Sbjct: 137 PSLVLA--RGHRIEGV-----PEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDS 189
Query: 594 QRLRAGKGKM 623
+RAGKGKM
Sbjct: 190 VAIRAGKGKM 199
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 224 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 334
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 330 PPRHMLPKAP*PDLWVPPP 274
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>05_07_0234 - 28566846-28567766
Length = 306
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -2
Query: 508 TLSATTQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPLSEVDATVPAPP 356
T+ T+G LG LF S +RW S+S+ +P S+ APP
Sbjct: 102 TVPPRTRGPLGRLFLEESRGSFDRWSTSTSSS-SSSSAPASDEGGLDGAPP 151
>03_05_0366 - 23505755-23506441
Length = 228
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 185 PYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGA 307
P C S E + +AES TG A R R+ G T+ + + A
Sbjct: 134 PRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPTNDNDEEA 174
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +2
Query: 146 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 316
+D+ ++ SR + + ++S+ W G R+ + GGG R G
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260
Query: 317 MCRGGRMFAPTKPWRRW 367
P PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 166 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 267
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 209 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 313
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 335 YVHHDTCYRRHPDRTYG 285
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>07_01_0469 - 3552409-3553368
Length = 319
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 335 YVHHDTCYRRHPDRTYG 285
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRFHPRRASG 110
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 311 RRHPDRTYGYHHHGHAEFGQQHVRYPMI 228
R H D +G+HHH H G H P +
Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGPEV 94
>05_05_0285 -
23855219-23855371,23855391-23856063,23856239-23856301,
23856478-23856604,23856751-23856897,23856968-23856974,
23857203-23857379
Length = 448
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 355 LAALAPSRQPPTAESGLGSSRCCYWRPSARS 447
+A AP AESG+G+ C +WR S S
Sbjct: 306 IAKDAPPAVEVKAESGVGTLGCAFWRTSLGS 336
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 335 YVHHDTCYRRHPDRTYG 285
Y+ HDT YR HP R G
Sbjct: 98 YIFHDTAYRFHPRRANG 114
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 327 PRHMLPKAP*PDLWVPPPRTRGIRATARPVP 235
P H++P P P L P P+++ R P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297
>11_01_0411 - 3114959-3115000,3115504-3116703
Length = 413
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 315 LPKAP*PDLWVPPPRTRGIRATARPVPHDSALV-W*PASL 199
+P P P LW+P P A P+ H S+L W P +L
Sbjct: 276 VPCPPAPPLWLPSPSVPSSLALHVPLFHASSLERWSPTAL 315
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +2
Query: 203 EAGHQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGRMFAPTKP-WR 361
E G ++ G++V + + R+R H G G+ G++ + GG+M P P WR
Sbjct: 74 EGGGSDKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGKMLRPGFPKWR 132
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = -1
Query: 302 PDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 201
P + +HHHGH + + H G PP
Sbjct: 33 PQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPP 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,984,654
Number of Sequences: 37544
Number of extensions: 374514
Number of successful extensions: 1509
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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