BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_P23
(623 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302654-1|CAC35519.1| 168|Anopheles gambiae gSG2-like protein ... 27 0.37
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 24 4.5
>AJ302654-1|CAC35519.1| 168|Anopheles gambiae gSG2-like protein
protein.
Length = 168
Score = 27.5 bits (58), Expect = 0.37
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 203 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 331
+ G Q S+G+G+ +P + G G +SG +FGN +GG
Sbjct: 121 QGGGQGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGG 162
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.8 bits (49), Expect = 4.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 333 RPPRHMLPKAP*PDLWVPPPRTRGIRATARP 241
RPP H P W+ PP R +TA P
Sbjct: 93 RPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,591
Number of Sequences: 2352
Number of extensions: 12330
Number of successful extensions: 55
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -