Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_P10
(508 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 202 4e-52
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 202 4e-52
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 202 4e-52
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 202 4e-52
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 126 6e-29
X89713-1|CAA61857.1| 907|Homo sapiens death associated protein ... 30 5.3
U76111-1|AAC51166.1| 907|Homo sapiens translation repressor NAT... 30 5.3
U73824-1|AAB49973.1| 907|Homo sapiens p97 protein. 30 5.3
BC111548-1|AAI11549.2| 869|Homo sapiens eukaryotic translation ... 30 5.3
BC111415-1|AAI11416.1| 907|Homo sapiens eukaryotic translation ... 30 5.3
BC043149-1|AAH43149.2| 907|Homo sapiens eukaryotic translation ... 30 5.3
BC039851-1|AAH39851.1| 907|Homo sapiens eukaryotic translation ... 30 5.3
BC018975-1|AAH18975.1| 907|Homo sapiens eukaryotic translation ... 30 5.3
BC018746-1|AAH18746.1| 907|Homo sapiens eukaryotic translation ... 30 5.3
AK223548-1|BAD97268.1| 907|Homo sapiens eukaryotic translation ... 30 5.3
AB209267-1|BAD92504.1| 940|Homo sapiens eukaryotic translation ... 30 5.3
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 202 bits (494), Expect = 4e-52
Identities = 96/114 (84%), Positives = 104/114 (91%)
Frame = +1
Query: 136 TSRNPRQRSPXIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITT 315
T + P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRITT
Sbjct: 6 TGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITT 65
Query: 316 RKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 477
RKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 66 RKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 202 bits (494), Expect = 4e-52
Identities = 96/114 (84%), Positives = 104/114 (91%)
Frame = +1
Query: 136 TSRNPRQRSPXIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITT 315
T + P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRITT
Sbjct: 6 TGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITT 65
Query: 316 RKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 477
RKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 66 RKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 202 bits (494), Expect = 4e-52
Identities = 96/114 (84%), Positives = 104/114 (91%)
Frame = +1
Query: 136 TSRNPRQRSPXIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITT 315
T + P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRITT
Sbjct: 6 TGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITT 65
Query: 316 RKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 477
RKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 66 RKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 202 bits (494), Expect = 4e-52
Identities = 96/114 (84%), Positives = 104/114 (91%)
Frame = +1
Query: 136 TSRNPRQRSPXIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITT 315
T + P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRITT
Sbjct: 6 TGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITT 65
Query: 316 RKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 477
RKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 66 RKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 126 bits (303), Expect = 6e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 271 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 450
KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60
>X89713-1|CAA61857.1| 907|Homo sapiens death associated protein 5
protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>U76111-1|AAC51166.1| 907|Homo sapiens translation repressor NAT1
protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>U73824-1|AAB49973.1| 907|Homo sapiens p97 protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>BC111548-1|AAI11549.2| 869|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 869
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>BC111415-1|AAI11416.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>BC043149-1|AAH43149.2| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>BC039851-1|AAH39851.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>BC018975-1|AAH18975.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>BC018746-1|AAH18746.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>AK223548-1|BAD97268.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 variant protein.
Length = 907
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 115
>AB209267-1|BAD92504.1| 940|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 variant protein.
Length = 940
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 AKTSRNPRQRSPXIHR-IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPV 282
A S N ++R I R +R L +K+C +L+N + KL +KG +
Sbjct: 97 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVI 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,009,924
Number of Sequences: 237096
Number of extensions: 1651057
Number of successful extensions: 3548
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3543
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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