Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_P08
(368 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 130 1e-30
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 130 1e-30
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 130 1e-30
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 130 1e-30
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 130 1e-30
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 130 1e-30
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 129 3e-30
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 62 4e-10
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 51 1e-06
BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein. 33 0.29
BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein. 33 0.29
AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens ... 33 0.29
AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein. 33 0.29
AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein. 33 0.29
BC052806-1|AAH52806.1| 128|Homo sapiens MRPL55 protein protein. 33 0.38
AY358771-1|AAQ89131.1| 164|Homo sapiens AAVG5835 protein. 33 0.38
AL136379-5|CAI23117.1| 164|Homo sapiens mitochondrial ribosomal... 33 0.38
AL136379-4|CAI23118.1| 125|Homo sapiens mitochondrial ribosomal... 33 0.38
AL136379-3|CAI23116.1| 128|Homo sapiens mitochondrial ribosomal... 33 0.38
BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclea... 30 2.0
BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclea... 30 2.0
AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein. 30 2.0
AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens ... 30 2.0
AB076384-1|BAB82982.1| 376|Homo sapiens X box-binding protein s... 28 8.2
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 130 bits (314), Expect = 1e-30
Identities = 65/92 (70%), Positives = 73/92 (79%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAM 250
RVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAM
Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAM 91
Query: 251 RKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 346
R+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 92 RRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 130 bits (314), Expect = 1e-30
Identities = 65/92 (70%), Positives = 73/92 (79%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAM 250
RVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAM
Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAM 91
Query: 251 RKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 346
R+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 92 RRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 130 bits (314), Expect = 1e-30
Identities = 65/92 (70%), Positives = 73/92 (79%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAM 250
RVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAM
Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAM 91
Query: 251 RKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 346
R+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 92 RRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 130 bits (314), Expect = 1e-30
Identities = 65/92 (70%), Positives = 73/92 (79%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAM 250
RVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAM
Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAM 91
Query: 251 RKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 346
R+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 92 RRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 130 bits (314), Expect = 1e-30
Identities = 65/92 (70%), Positives = 73/92 (79%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAM 250
RVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAM
Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAM 91
Query: 251 RKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 346
R+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 92 RRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 130 bits (314), Expect = 1e-30
Identities = 65/92 (70%), Positives = 73/92 (79%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAM 250
RVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAM
Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAM 91
Query: 251 RKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 346
R+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 92 RRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 129 bits (311), Expect = 3e-30
Identities = 64/92 (69%), Positives = 73/92 (79%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAM 250
RVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAM
Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAM 91
Query: 251 RKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 346
R+ L KHE +KT+K+ RK+ L+P R YAV+A
Sbjct: 92 RRRLNKHEENLKTKKQQRKERLYPLRKYAVRA 123
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYK 199
RVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK
Sbjct: 31 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYK 73
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +2
Query: 71 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 166
RVAKVTGG ASKLSKIRVVRK+IARV V +Q
Sbjct: 2 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
>BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 179 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 316
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein.
Length = 255
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 179 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 316
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ25376 fis, clone TST02010. ).
Length = 255
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 179 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 316
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 179 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 316
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein.
Length = 361
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 179 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 316
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 5 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 50
>BC052806-1|AAH52806.1| 128|Homo sapiens MRPL55 protein protein.
Length = 128
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 98 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 265
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 266 KHEAKIKTRKEIRKK 310
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>AY358771-1|AAQ89131.1| 164|Homo sapiens AAVG5835 protein.
Length = 164
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 98 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 265
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 71 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 130
Query: 266 KHEAKIKTRKEIRKK 310
K EA++++RKE ++
Sbjct: 131 KREAQLQSRKEYEQE 145
>AL136379-5|CAI23117.1| 164|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 164
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 98 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 265
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 71 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 130
Query: 266 KHEAKIKTRKEIRKK 310
K EA++++RKE ++
Sbjct: 131 KREAQLQSRKEYEQE 145
>AL136379-4|CAI23118.1| 125|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 125
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 98 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 265
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 32 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 91
Query: 266 KHEAKIKTRKEIRKK 310
K EA++++RKE ++
Sbjct: 92 KREAQLQSRKEYEQE 106
>AL136379-3|CAI23116.1| 128|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 128
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 98 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 265
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 266 KHEAKIKTRKEIRKK 310
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 119 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEA--KIK 286
RV RK R+ + M+ ++ +NK+ K L L+ ++ AM A KHE+ K
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 287 TRKEIRKKSL 316
R+++R+ S+
Sbjct: 110 MRQQVRENSI 119
>BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 119 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEA--KIK 286
RV RK R+ + M+ ++ +NK+ K L L+ ++ AM A KHE+ K
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 287 TRKEIRKKSL 316
R+++R+ S+
Sbjct: 110 MRQQVRENSI 119
>AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein.
Length = 1304
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 161 HQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 316
+QK+++ + +N+K K LD K+ + KAL KI TR + ++ L
Sbjct: 850 YQKIQLQRKLREENEKRKQLDAVIKRDQQKIKALNTDSLKISTRLNLLEQEL 901
>AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ11222 fis, clone PLACE1008177. ).
Length = 495
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 119 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEA--KIK 286
RV RK R+ + M+ ++ +NK+ K L L+ ++ AM A KHE+ K
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 287 TRKEIRKKSL 316
R+++R+ S+
Sbjct: 110 MRQQVRENSI 119
>AB076384-1|BAB82982.1| 376|Homo sapiens X box-binding protein
spliced form protein.
Length = 376
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 349 SSFNGIDSRWEERFLSDLFPRL 284
SS G++ WE+ F ++LFP+L
Sbjct: 352 SSLLGVNHSWEDTFANELFPQL 373
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,964,975
Number of Sequences: 237096
Number of extensions: 643365
Number of successful extensions: 1738
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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