Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_O23
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 176 5e-44
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 176 5e-44
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 176 5e-44
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 176 5e-44
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 172 1e-42
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 83 1e-15
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 63 1e-09
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.38
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 3.6
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 3.6
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 3.6
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 4.7
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 4.7
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 4.7
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 4.7
Z75746-3|CAI41986.1| 360|Homo sapiens nuclear RNA export factor... 30 8.2
AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens ... 30 8.2
AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens ... 30 8.2
AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens ... 30 8.2
AJ277660-1|CAC20434.1| 360|Homo sapiens nuclear RNA export fact... 30 8.2
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 176 bits (429), Expect = 5e-44
Identities = 80/100 (80%), Positives = 88/100 (88%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLXNWRKP 438
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHL P
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENP 108
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +2
Query: 422 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 547
LTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 103 LTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 75.4 bits (177), Expect = 2e-13
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +3
Query: 489 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 650
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELI
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELI 178
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 176 bits (429), Expect = 5e-44
Identities = 80/100 (80%), Positives = 88/100 (88%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLXNWRKP 438
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHL P
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENP 108
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +2
Query: 422 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 547
LTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 103 LTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 75.4 bits (177), Expect = 2e-13
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +3
Query: 489 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 650
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELI
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELI 178
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 176 bits (429), Expect = 5e-44
Identities = 80/100 (80%), Positives = 88/100 (88%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLXNWRKP 438
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHL P
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENP 108
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +2
Query: 422 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 547
LTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 103 LTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 75.4 bits (177), Expect = 2e-13
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +3
Query: 489 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 650
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELI
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELI 178
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 176 bits (429), Expect = 5e-44
Identities = 80/100 (80%), Positives = 88/100 (88%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLXNWRKP 438
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHL P
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENP 108
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +2
Query: 422 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 547
LTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 103 LTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 75.4 bits (177), Expect = 2e-13
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +3
Query: 489 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 650
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELI
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELI 178
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 172 bits (418), Expect = 1e-42
Identities = 78/100 (78%), Positives = 86/100 (86%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLXNWRKP 438
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHL P
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENP 108
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +2
Query: 422 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 547
LTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 103 LTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 75.4 bits (177), Expect = 2e-13
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +3
Query: 489 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 650
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELI
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELI 178
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +1
Query: 304 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHL 420
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHL
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHL 39
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3
Query: 564 AIWLLCTGAREAAFRNIKTIAECVADELI 650
AIWLLCTGAREAAFRNIKTIAEC+ADELI
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELI 29
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.38
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 367 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 275
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 367 CHCSDRASLESL*GAPRLGTGLYGNACVH 281
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 367 CHCSDRASLESL*GAPRLGTGLYGNACVH 281
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 367 CHCSDRASLESL*GAPRLGTGLYGNACVH 281
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 220 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 363
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 220 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 363
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 220 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 363
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 220 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 363
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>Z75746-3|CAI41986.1| 360|Homo sapiens nuclear RNA export factor 3
protein.
Length = 360
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 535 CFTLGAESTKQSGFCAQVHVRLHSEILKQSQSV 633
CF++ + SGFC+++H LH +Q QSV
Sbjct: 326 CFSVNGVFKEVSGFCSRLHPDLHCYPWQQFQSV 358
>AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ44741 fis, clone BRACE3027931. ).
Length = 398
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 MCKSLICLCRTTFPLKRSTQNIYLIQLA 277
+CKS C+C +T + ST+ Y QLA
Sbjct: 259 VCKSTYCICNSTHCVCNSTRTAYATQLA 286
>AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ37556 fis, clone BRCAN2028545. ).
Length = 149
Score = 29.9 bits (64), Expect = 8.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 644 FICNTLCDCFNISECSLTCTCAQKPDCLVDSAPRV 540
++C +C C + C C CA C+V + RV
Sbjct: 106 YVCKRVCTCACVCMCVQVCMCASVHMCIVCVSVRV 140
>AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ12986 fis, clone NT2RP3000055. ).
Length = 171
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 MCKSLICLCRTTFPLKRSTQNIYLIQLA 277
+CKS C+C +T + ST+ Y QLA
Sbjct: 32 VCKSTYCICNSTHCVCNSTRTAYATQLA 59
>AJ277660-1|CAC20434.1| 360|Homo sapiens nuclear RNA export factor
3 protein.
Length = 360
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 535 CFTLGAESTKQSGFCAQVHVRLHSEILKQSQSV 633
CF++ + SGFC+++H LH +Q QSV
Sbjct: 326 CFSVNGVFKEVSGFCSRLHPDLHCYPWQQFQSV 358
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,647,554
Number of Sequences: 237096
Number of extensions: 1971621
Number of successful extensions: 4457
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4455
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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