Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_O18
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein. 84 2e-16
S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha cha... 84 2e-16
S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein. 84 2e-16
BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 84 2e-16
S68020-1|AAB29008.1| 37|Homo sapiens c6.1A protein. 48 3e-05
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 36 0.062
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 36 0.062
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 36 0.062
AK027887-1|BAB55432.1| 451|Homo sapiens protein ( Homo sapiens ... 36 0.11
AC007292-2|AAD24593.1| 448|Homo sapiens R31167_2, partial prote... 36 0.11
AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial prote... 36 0.11
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 33 0.44
BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing p... 33 0.44
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 33 0.58
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 33 0.58
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 33 0.58
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 33 0.58
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 33 0.58
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 33 0.58
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 33 0.77
>X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein.
Length = 291
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha
chain-c6.1A fusion protein protein.
Length = 363
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 40 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 89
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 91 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 131
>S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein.
Length = 321
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 89 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 138
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 21 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 50
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 140 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 180
>BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 85 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 134
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 136 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 176
>BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 226
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 60 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 109
Score = 54.8 bits (126), Expect = 2e-07
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRR 141
SD LVC+ HALSTEKEE+MGL IGEV D +V I S +ILRR
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGEV-DAVRIVHIHSVIILRR 58
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 111 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 151
>BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 90
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 26 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 75
>BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 85 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 134
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 136 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 176
>BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex subunit 36 protein.
Length = 316
Score = 84.2 bits (199), Expect = 2e-16
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 146 DKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 295
DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSH
Sbjct: 84 DKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 133
Score = 49.6 bits (113), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHDN 99
SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 16 SDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 300 DLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITWFSN 422
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175
>S68020-1|AAB29008.1| 37|Homo sapiens c6.1A protein.
Length = 37
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 10 SDVALVCMQHALSTEKEEIMGLLIGEVHD 96
SD LVC+ HALSTEKEE+MGL IGE+ +
Sbjct: 2 SDAFLVCLNHALSTEKEEVMGLCIGEIQN 30
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 36.3 bits (80), Expect = 0.062
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
++ + G+P VVGWYHSHP W S
Sbjct: 97 DMLKQTGRPEMVVGWYHSHPGFGCWLS 123
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 36.3 bits (80), Expect = 0.062
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
++ + G+P VVGWYHSHP W S
Sbjct: 97 DMLKQTGRPEMVVGWYHSHPGFGCWLS 123
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 36.3 bits (80), Expect = 0.062
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
++ + G+P VVGWYHSHP W S
Sbjct: 97 DMLKQTGRPEMVVGWYHSHPGFGCWLS 123
>AK027887-1|BAB55432.1| 451|Homo sapiens protein ( Homo sapiens
cDNA FLJ14981 fis, clone Y79AA1000202. ).
Length = 451
Score = 35.5 bits (78), Expect = 0.11
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +2
Query: 239 LRVVGWYHSHPHITVWPS----HX*FGYSINV--SKDGC*FCWNYFCSISYRPINKGPFS 400
L +VGWYHSHPH PS Y + + S +G C CS Y N GP S
Sbjct: 292 LSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCS-PYYSGNPGPES 350
Query: 401 --SNYLVFKSINEGASQSRIEIEMEIVTNTDSLV 496
S + V + S I +++E+ DS +
Sbjct: 351 KISPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFL 384
>AC007292-2|AAD24593.1| 448|Homo sapiens R31167_2, partial protein
protein.
Length = 448
Score = 35.5 bits (78), Expect = 0.11
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +2
Query: 239 LRVVGWYHSHPHITVWPS----HX*FGYSINV--SKDGC*FCWNYFCSISYRPINKGPFS 400
L +VGWYHSHPH PS Y + + S +G C CS Y N GP S
Sbjct: 289 LSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCS-PYYSGNPGPES 347
Query: 401 --SNYLVFKSINEGASQSRIEIEMEIVTNTDSLV 496
S + V + S I +++E+ DS +
Sbjct: 348 KISPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFL 381
>AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial protein
protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.11
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +2
Query: 239 LRVVGWYHSHPHITVWPS----HX*FGYSINV--SKDGC*FCWNYFCSISYRPINKGPFS 400
L +VGWYHSHPH PS Y + + S +G C CS Y N GP S
Sbjct: 339 LSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCS-PYYSGNPGPES 397
Query: 401 --SNYLVFKSINEGASQSRIEIEMEIVTNTDSLV 496
S + V + S I +++E+ DS +
Sbjct: 398 KISPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFL 431
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 33.5 bits (73), Expect = 0.44
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +2
Query: 347 WNYFCSISYRPINKGPFSS-----NYLVFK-SINEGASQSRI-EIEMEIVTNTDSL 493
W YF S+S +P+ + F S Y++ K S +G QSRI +I ME+ + L
Sbjct: 1294 WKYFNSVSEKPVTREDFMSVLSDIEYILIKASYGQGLQQSRISDISMEVGRKAEKL 1349
>BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing
protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.44
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 239 LRVVGWYHSHPHITVWPS 292
L +VGWYHSHPH PS
Sbjct: 342 LSLVGWYHSHPHSPALPS 359
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
E A +VG+ +GWYHSHP W S
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLS 148
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
E A +VG+ +GWYHSHP W S
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLS 148
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
E A +VG+ +GWYHSHP W S
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLS 148
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
E A +VG+ +GWYHSHP W S
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLS 148
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
E A +VG+ +GWYHSHP W S
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLS 148
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
E A +VG+ +GWYHSHP W S
Sbjct: 91 ENAKQVGRLENAIGWYHSHPGYGCWLS 117
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 32.7 bits (71), Expect = 0.77
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 212 ELAAEVGQPLRVVGWYHSHPHITVWPS 292
E A +VG +GWYHSHP W S
Sbjct: 122 ENAKQVGHLENAIGWYHSHPGYGCWLS 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,393,567
Number of Sequences: 237096
Number of extensions: 989778
Number of successful extensions: 2140
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2140
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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