Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_O17
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...   200   1e-51
U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...   200   1e-51
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...   200   1e-51
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...   200   1e-51
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...   200   1e-51

>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score =  200 bits (489), Expect = 1e-51
 Identities = 97/104 (93%), Positives = 98/104 (94%)
 Frame = +3

Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 353
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 354 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 485
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 140



 Score =  119 bits (287), Expect = 3e-27
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +1

Query: 484 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 651
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP K
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRK 195


>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  200 bits (489), Expect = 1e-51
 Identities = 97/104 (93%), Positives = 98/104 (94%)
 Frame = +3

Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 353
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 354 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 485
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 140



 Score =  119 bits (287), Expect = 3e-27
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +1

Query: 484 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 651
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP K
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKK 195


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  200 bits (489), Expect = 1e-51
 Identities = 97/104 (93%), Positives = 98/104 (94%)
 Frame = +3

Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 353
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 354 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 485
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 140



 Score =  119 bits (287), Expect = 3e-27
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +1

Query: 484 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 651
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP K
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKK 195


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score =  200 bits (489), Expect = 1e-51
 Identities = 97/104 (93%), Positives = 98/104 (94%)
 Frame = +3

Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 353
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 354 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 485
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 140



 Score =  119 bits (287), Expect = 3e-27
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +1

Query: 484 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 651
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP K
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKK 195


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score =  200 bits (489), Expect = 1e-51
 Identities = 97/104 (93%), Positives = 98/104 (94%)
 Frame = +3

Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 353
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96

Query: 354 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 485
           KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL
Sbjct: 97  KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 140



 Score =  119 bits (287), Expect = 3e-27
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +1

Query: 484 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 651
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP K
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKK 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,234,915
Number of Sequences: 53049
Number of extensions: 620903
Number of successful extensions: 1617
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)