Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_O16
(493 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 128 1e-29
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 128 1e-29
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 128 1e-29
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 128 1e-29
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 128 1e-29
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 128 1e-29
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 126 6e-29
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 1e-26
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 99 7e-21
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 128 bits (308), Expect = 1e-29
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 356 AYSTGXXXXXXXXXXXXXDTLYTGTXMSQVMNTMLNLSTMD 478
AY TG D +Y G +V N+ ++D
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 436 VTGDEYNVEPVDNGPG 483
VTGDEYNVE +D PG
Sbjct: 125 VTGDEYNVESIDGQPG 140
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 128 bits (308), Expect = 1e-29
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 356 AYSTGXXXXXXXXXXXXXDTLYTGTXMSQVMNTMLNLSTMD 478
AY TG D +Y G +V N+ ++D
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 436 VTGDEYNVEPVDNGPG 483
VTGDEYNVE +D PG
Sbjct: 125 VTGDEYNVESIDGQPG 140
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 128 bits (308), Expect = 1e-29
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 356 AYSTGXXXXXXXXXXXXXDTLYTGTXMSQVMNTMLNLSTMD 478
AY TG D +Y G +V N+ ++D
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 436 VTGDEYNVEPVDNGPG 483
VTGDEYNVE +D PG
Sbjct: 125 VTGDEYNVESIDGQPG 140
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 128 bits (308), Expect = 1e-29
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 356 AYSTGXXXXXXXXXXXXXDTLYTGTXMSQVMNTMLNLSTMD 478
AY TG D +Y G +V N+ ++D
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 436 VTGDEYNVEPVDNGPG 483
VTGDEYNVE +D PG
Sbjct: 125 VTGDEYNVESIDGQPG 140
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 128 bits (308), Expect = 1e-29
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 356 AYSTGXXXXXXXXXXXXXDTLYTGTXMSQVMNTMLNLSTMD 478
AY TG D +Y G +V N+ ++D
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 436 VTGDEYNVEPVDNGPG 483
VTGDEYNVE +D PG
Sbjct: 125 VTGDEYNVESIDGQPG 140
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 128 bits (308), Expect = 1e-29
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 356 AYSTGXXXXXXXXXXXXXDTLYTGTXMSQVMNTMLNLSTMD 478
AY TG D +Y G +V N+ ++D
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 143
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 436 VTGDEYNVEPVDNGPG 483
VTGDEYNVE +D PG
Sbjct: 132 VTGDEYNVESIDGQPG 147
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 126 bits (303), Expect = 6e-29
Identities = 57/101 (56%), Positives = 72/101 (71%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 356 AYSTGXXXXXXXXXXXXXDTLYTGTXMSQVMNTMLNLSTMD 478
AY TG D +Y G +V N+ ++D
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEG--QVEVTGDEYNVESID 136
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 436 VTGDEYNVEPVDNGPG 483
VTGDEYNVE +D PG
Sbjct: 125 VTGDEYNVESIDGQPG 140
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (283), Expect = 1e-26
Identities = 49/61 (80%), Positives = 59/61 (96%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 356 A 358
A
Sbjct: 98 A 98
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 99.1 bits (236), Expect = 7e-21
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 215 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 394
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 395 XXXXXDTLYTGTXMSQVMNTMLNLSTMD 478
D +Y G +V N+ ++D
Sbjct: 61 NRFGMDKIYEG--QVEVTGDEYNVESID 86
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 436 VTGDEYNVEPVDNGPG 483
VTGDEYNVE +D PG
Sbjct: 75 VTGDEYNVESIDGQPG 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,138,596
Number of Sequences: 237096
Number of extensions: 1412658
Number of successful extensions: 2449
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2449
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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