Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_O16
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 122 1e-28
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.0
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical ... 27 7.4
Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical pr... 27 9.8
U64846-2|AAG24112.1| 332|Caenorhabditis elegans Serpentine rece... 27 9.8
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 122 bits (294), Expect = 1e-28
Identities = 56/84 (66%), Positives = 65/84 (77%)
Frame = +2
Query: 176 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 355
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 356 AYSTGXXXXXXXXXXXXXDTLYTG 427
AY+TG D+ Y G
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKG 121
Score = 71.3 bits (167), Expect = 3e-13
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 171
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 299 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 186
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 299 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 186
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 194 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 313
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 341 SDQPSHHNVATHVNKQRTQYGHLQSESRP 255
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 341 SDQPSHHNVATHVNKQRTQYGHLQSESRP 255
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 341 SDQPSHHNVATHVNKQRTQYGHLQSESRP 255
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical
protein C29G2.5 protein.
Length = 391
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 185 KNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 277
K+K TP YRL++ L + D+T V S I G
Sbjct: 187 KSKSRTPTYRLMLILGSLDLTGLVISSLIPG 217
>Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical
protein T20D3.8 protein.
Length = 282
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 236 KDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 370
+ +T ++ I I+ A +S YGVK + +Y + STG
Sbjct: 127 RTLTTSISTDTIYSTSIITAIFSCFFHDYGVKAPVVSYPTSVSTG 171
>U64846-2|AAG24112.1| 332|Caenorhabditis elegans Serpentine
receptor, class t protein35 protein.
Length = 332
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 471 VDRFNIVFITCDXCVPVYKVSSPSL*SSLRANSR 370
V+ F+IV ITC +P YK+ +L S +NSR
Sbjct: 202 VNNFSIVAITCALYIPFYKIVRGNLKIS-GSNSR 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,320,100
Number of Sequences: 27780
Number of extensions: 224552
Number of successful extensions: 563
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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