Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_O14
         (361 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   123   7e-31
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   123   7e-31
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       23   1.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   1.9  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   4.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.9  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    20   7.7  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  123 bits (296), Expect = 7e-31
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = +2

Query: 104 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 283
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 284 VRIPKEQGLPFILAW 328
           VRIPKEQG  F+  W
Sbjct: 61  VRIPKEQG--FLSYW 73



 Score = 29.1 bits (62), Expect = 0.017
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 312 LSFWRGNFANVIR 350
           LS+WRGN ANVIR
Sbjct: 70  LSYWRGNLANVIR 82


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  123 bits (296), Expect = 7e-31
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = +2

Query: 104 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 283
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 284 VRIPKEQGLPFILAW 328
           VRIPKEQG  F+  W
Sbjct: 61  VRIPKEQG--FLSYW 73



 Score = 29.1 bits (62), Expect = 0.017
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 312 LSFWRGNFANVIR 350
           LS+WRGN ANVIR
Sbjct: 70  LSYWRGNLANVIR 82


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 305 GLPFILAW*LRQRHQG 352
           GLP +++W  R+R QG
Sbjct: 55  GLPALISWIKRKRQQG 70


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 232 QQADRRRPALQGYRRCLRPYPQGAGSPFHSGVVTSPTS 345
           QQ  + + A Q  +  + P  Q      H GVVTSP S
Sbjct: 205 QQQQQSQAASQQSQPGMHPRQQQQAQQ-HQGVVTSPLS 241


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 29  VIPHPRVPQLPPRHIHLVKIT 91
           +I  P   +LPP H H   +T
Sbjct: 92  IITIPPTRKLPPLHPHTAMVT 112


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 227 HVSKQIAADQRYKGIVDAFVRIPK 298
           ++ K IAA   +KG+     RIP+
Sbjct: 763 YIQKMIAAAAPFKGMETQDYRIPE 786


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 106 HFVRLCDLH*VNMSRWEL 53
           +F+++C ++ VNM+  EL
Sbjct: 130 NFIKVCSVNDVNMTITEL 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,567
Number of Sequences: 438
Number of extensions: 1703
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)