Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_N14
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 73 9e-14
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 73 9e-14
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 73 9e-14
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 73 9e-14
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 73 9e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 70 1e-12
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 70 1e-12
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 45 3e-05
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 40 8e-04
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 36 0.022
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.0
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.0
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.6
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 6.0
U41029-3|AAF99952.2| 886|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 20 SDTIENVKAKIQDKEGIP 37
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 20 SDTIENVKAKIQDKEGIP 37
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 96 SDTIENVKAKIQDKEGIP 113
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 172 SDTIENVKAKIQDKEGIP 189
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 248 SDTIENVKAKIQDKEGIP 265
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 324 SDTIENVKAKIQDKEGIP 341
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 400 SDTIENVKAKIQDKEGIP 417
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 476 SDTIENVKAKIQDKEGIP 493
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 559 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 635 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 711 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 787 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 20 SDTIENVKAKIQDKEGIP 37
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 96 SDTIENVKAKIQDKEGIP 113
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 172 SDTIENVKAKIQDKEGIP 189
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 248 SDTIENVKAKIQDKEGIP 265
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 324 SDTIENVKAKIQDKEGIP 341
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 400 SDTIENVKAKIQDKEGIP 417
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 476 SDTIENVKAKIQDKEGIP 493
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 552 SDTIENVKAKIQDKEGIP 569
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 628 SDTIENVKAKIQDKEGIP 645
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 704 SDTIENVKAKIQDKEGIP 721
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 780 SDTIENVKAKIQDKEGIP 797
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 559 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 635 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 711 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 72.1 bits (169), Expect = 2e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 787 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 20 SDTIENVKAKIQDKEGIP 37
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 96 SDTIENVKAKIQDKEGIP 113
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 172 SDTIENVKAKIQDKEGIP 189
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 248 SDTIENVKAKIQDKEGIP 265
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 324 SDTIENVKAKIQDKEGIP 341
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 400 SDTIENVKAKIQDKEGIP 417
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 476 SDTIENVKAKIQDKEGIP 493
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 552 SDTIENVKAKIQDKEGIP 569
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 628 SDTIENVKAKIQDKEGIP 645
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 704 SDTIENVKAKIQDKEGIP 721
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 780 SDTIENVKAKIQDKEGIP 797
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 20 SDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 69.7 bits (163), Expect = 1e-12
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 270 FTRVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMV 404
+ ++DENGKI RLR+EC CG GVFMA +RHYCG+CH T+V
Sbjct: 99 YYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLV 143
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYS 214
K K + +QRL +AG+QLED SD I E+T+++ Y+
Sbjct: 25 KQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVYT 80
Query: 215 TPXXXXXXXXXXXLAVLRFYK 277
TP LAVL++YK
Sbjct: 81 TPKKNKRKPKKVKLAVLKYYK 101
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 69.7 bits (163), Expect = 1e-12
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 270 FTRVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMV 404
+ ++DENGKI RLR+EC CG GVFMA +RHYCG+CH T+V
Sbjct: 99 YYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLV 143
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYS 214
K K + +QRL +AG+QLED SD I E+T+++ Y+
Sbjct: 25 KQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVYT 80
Query: 215 TPXXXXXXXXXXXLAVLRFYK 277
TP LAVL++YK
Sbjct: 81 TPKKNKRKPKKVKLAVLKYYK 101
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 27 KEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
Score = 28.3 bits (60), Expect = 3.4
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
+D +E +K K+++KEGIP
Sbjct: 20 NDRVERIKEKVEEKEGIP 37
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 166
K K + K P+QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 187 KFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 107 EDGRTLSDYNIQKESTLHL 163
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
Score = 27.9 bits (59), Expect = 4.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
+DT+E +K K+Q+K G+P
Sbjct: 180 TDTVETLKFKVQNKHGVP 197
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 13 SDTIENVKAKIQDKEGIP 66
SDTIENVKAKIQDKEGIP
Sbjct: 20 SDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 83 LIFAGKQLEDGRTLSDYNIQKESTL 157
L F+GK+LED ++ DYNIQK ST+
Sbjct: 195 LSFSGKRLEDHCSIGDYNIQKSSTI 219
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 80 RLIFAGKQLEDGRTLSDYNIQKESTLHL 163
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 STPGGGWIPSGYCSPRGYVHLPAAFQQ 90
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 35 KLKFKTKRESXPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 163
KL+ + + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 222 KLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 83 LIFAGKQLEDGRTLSDYNIQKESTLHL 163
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U41029-3|AAF99952.2| 886|Caenorhabditis elegans Hypothetical
protein F47G3.1 protein.
Length = 886
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 19 TIENVKAKIQDKEGIPSQSTEVD 87
++ V+ KI DK G+PS EVD
Sbjct: 772 SLSTVQQKISDKAGVPSFKVEVD 794
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 277 GSTRTVRSTVCGASAQASSAAPECSWR*WRTVTTAGSVIARWSSKTTTN 423
GST T STV G++A SS + S T AGS ++ S+ T T+
Sbjct: 1021 GSTVTGESTVSGSTASTSSGSTGSS-------TEAGSTVSGSSASTVTS 1062
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,166,632
Number of Sequences: 27780
Number of extensions: 209243
Number of successful extensions: 610
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -