Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_N11
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical ... 128 3e-30
AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical ... 127 8e-30
AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical ... 64 8e-11
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 36 0.019
U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical pr... 32 0.40
U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 30 1.6
AC024881-2|AAK71414.1| 274|Caenorhabditis elegans Serpentine re... 29 2.1
Z93397-7|CAB07722.2| 483|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z93372-6|CAB07549.2| 483|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 28 6.6
U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 27 8.7
U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (gr... 27 8.7
U40030-1|AAR12977.1| 235|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 27 8.7
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 27 8.7
>AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical
protein F40A3.3a protein.
Length = 221
Score = 128 bits (309), Expect = 3e-30
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Frame = +1
Query: 142 RAMSTVA-KSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTLVKDEPSVKWD 315
R ++T+A ++F +V+PDV+ P+ ++ VK+ SGVE GN LTPT VKD P VKWD
Sbjct: 32 RGLATMAAEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWD 91
Query: 316 AEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG 426
AEPG YTL TDPDAPSRKEPT+REWHHWLV NI G
Sbjct: 92 AEPGALYTLIKTDPDAPSRKEPTYREWHHWLVVNIPG 128
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 407 WLATS-RXNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKL-TFDEPRLTNTSSDK 580
WL + N++ G+TLS+Y+G+GPP KTGLHRYV+L+YKQ ++ + RLTNTS DK
Sbjct: 121 WLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHRYVYLIYKQSGRIEDAEHGRLTNTSGDK 180
Query: 581 RANFKIAEFAKKYNLXDPIAGN 646
R +K A+F K+ L P+ GN
Sbjct: 181 RGGWKAADFVAKHKLGAPVFGN 202
>AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical
protein F40A3.3b protein.
Length = 185
Score = 127 bits (306), Expect = 8e-30
Identities = 57/90 (63%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Frame = +1
Query: 160 AKSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTLVKDEPSVKWDAEPGQYY 336
A++F +V+PDV+ P+ ++ VK+ SGVE GN LTPT VKD P VKWDAEPG Y
Sbjct: 3 AEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWDAEPGALY 62
Query: 337 TLAMTDPDAPSRKEPTFREWHHWLVGNIQG 426
TL TDPDAPSRKEPT+REWHHWLV NI G
Sbjct: 63 TLIKTDPDAPSRKEPTYREWHHWLVVNIPG 92
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +2
Query: 407 WLATS-RXNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKL-TFDEPRLTNTSSDK 580
WL + N++ G+TLS+Y+G+GPP KTGLHRYV+L+YKQ ++ + RLTNTS DK
Sbjct: 85 WLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHRYVYLIYKQSGRIEDAEHGRLTNTSGDK 144
Query: 581 RANFKIAEFAKKYNLXDPIAGN 646
R +K A+F K+ L P+ GN
Sbjct: 145 RGGWKAADFVAKHKLGAPVFGN 166
>AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical
protein Y69E1A.5 protein.
Length = 172
Score = 64.1 bits (149), Expect = 8e-11
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +1
Query: 148 MSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTLVKDEPSVKW---DA 318
MS ++ +F ++ P +I AP L + + G++V+ G + +K+ P +W A
Sbjct: 1 MSDISAAFAQHEITPKIIENAPKQKLHLCW-DGIQVEPGMTMQVRNLKNAP--RWALPGA 57
Query: 319 EPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNI 420
+P YT+ M DPD SRK P+ EW HWLV NI
Sbjct: 58 DPESIYTVLMIDPDNLSRKNPSVAEWLHWLVCNI 91
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +2
Query: 413 ATSRXNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANF 592
A++ + +N G+ Y P +T LHRYV L+++ + R++ RA F
Sbjct: 93 ASNIIDGINGGQHQMAYGSPAPGPRTDLHRYVILMWEHAGR------RISVPKPSSRAKF 146
Query: 593 KIAEFAKKYNLXDPIAGN 646
+ +F +K L DPIAGN
Sbjct: 147 NVKQFIEKNKLGDPIAGN 164
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 453 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT 623
C ST+ +K Q C TCS C+++ SS S+S S + ++ S SS S++
Sbjct: 18 CTSTFYTTAQKTQYCASTCSLCSDSSDSSSSSSTASTSSSSSTAATSSDDSSSSSSS 74
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 453 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATN 581
C S++ K Q C TCS C+++ SS S+S S + T+
Sbjct: 147 CTSSFYTTAIKTQYCAATCSLCSSSSDSSSSSSTASTSSSCTD 189
>U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical
protein F41G3.19 protein.
Length = 146
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 444 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATN 581
A C ++ L L K Q C TC CT++ +S +TS S + TN
Sbjct: 64 ASYCTNSVYLTLMKTQ-CPKTCGYCTSSSSTSSTTSSSSTCVDLTN 108
>U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical
protein F41G3.20 protein.
Length = 232
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 444 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLP 602
A C ++ L L K+Q C TC CT++ ++ S+S + L + +S P
Sbjct: 101 ASYCANSAYLTLMKQQ-CPKTCGYCTSSSATTTSSSSTCIDLTNASTGVSDCP 152
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 444 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTS 551
A C ++ L L K+Q C TC CT++ SS S+S
Sbjct: 155 ASYCTNSAYLTLMKQQ-CPKTCGYCTSSSSSSSSSS 189
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -3
Query: 471 EPTYWDKVSPEFTSLXLDVANQPVVPFAKCGFFTGRRIRVGHGQS 337
+ TYWD + + +A P++ ++ + RRIR+GH +
Sbjct: 589 QSTYWDDNDTTYIYTLIGLACIPLICYSIGHYMVERRIRIGHNSA 633
>AC024881-2|AAK71414.1| 274|Caenorhabditis elegans Serpentine
receptor, class sx protein7 protein.
Length = 274
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 527 VVCTRGTRICAGLSFPEVQSPRT 459
++C GT + GL+FP++Q RT
Sbjct: 58 IICLLGTMVDVGLAFPDIQLDRT 80
>Z93397-7|CAB07722.2| 483|Caenorhabditis elegans Hypothetical
protein ZC482.5 protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -1
Query: 224 NKAAGAFGITSGTTWLASKDFATVDIALVKTLKLTIVATNILKKLCLKQMNNCVQVFVKV 45
N A G T+G +D VD V+ + + A KKLC K +F ++
Sbjct: 360 NTAMGQM-FTAGLMGARRRDTIQVDDLTVEKEEARLKAVPWWKKLCFKDEQGNTSMFYRM 418
Query: 44 KVDARFSKQKVLTG 3
V A +K+ + G
Sbjct: 419 AVKAAIAKKTLRNG 432
>Z93372-6|CAB07549.2| 483|Caenorhabditis elegans Hypothetical
protein ZC482.5 protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -1
Query: 224 NKAAGAFGITSGTTWLASKDFATVDIALVKTLKLTIVATNILKKLCLKQMNNCVQVFVKV 45
N A G T+G +D VD V+ + + A KKLC K +F ++
Sbjct: 360 NTAMGQM-FTAGLMGARRRDTIQVDDLTVEKEEARLKAVPWWKKLCFKDEQGNTSMFYRM 418
Query: 44 KVDARFSKQKVLTG 3
V A +K+ + G
Sbjct: 419 AVKAAIAKKTLRNG 432
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 647 SCPQSDPXGCTSWRTRQF 594
SCP D GCT+W+ F
Sbjct: 252 SCPSVDSYGCTNWKNYDF 269
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -2
Query: 619 VLLGELGNFEIGTFVARSVSESRLVECELRWLFVQEEHVSVQACLFRRSR 470
V+ LG+ G + + + EC LR+L ++H + CL + R
Sbjct: 1536 VVQSVLGDNTAGGYATAAAGVETVDECGLRYLMAMKQHEYLMVCLPMKQR 1585
>U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical
protein C56G2.4 protein.
Length = 538
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 410 LATSRXNEVN-SGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRA 586
+ + N N +G T + YV P + + H Y+F+L QP+ + E + R
Sbjct: 381 IPAANLNAANGNGLTKADYVPLIPKKPSTCHSYLFVLLAQPASMQTLE-SYCEGMCETRK 439
Query: 587 NFKIAEFAKKYNL 625
F++ F +++ L
Sbjct: 440 KFRLELFKQQHGL 452
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -1
Query: 152 DIALVKTLKLTIVATNILKKLCLKQMNNCVQVFVKVKVDARFSKQKV 12
++A+VKT K + I+K + + +MN Q+F K+D ++KV
Sbjct: 318 NLAIVKTEKRISMMAEIIKYIRIVKMNGWEQIF-SAKIDQFRKEEKV 363
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -1
Query: 152 DIALVKTLKLTIVATNILKKLCLKQMNNCVQVFVKVKVDARFSKQKV 12
++A+VKT K + I+K + + +MN Q+F K+D ++KV
Sbjct: 318 NLAIVKTEKRISMMAEIIKYIRIVKMNGWEQIF-SAKIDQFRKEEKV 363
>U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (grd
related) protein12 protein.
Length = 186
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +3
Query: 402 LAGWQHPGXTR*TPAKLCPSTWALDLR----KRQACTDTCSSCTNNHRSSHSTSRDSLTL 569
L G + G + P CP+T + AC +TC +C R H T + T
Sbjct: 23 LFGGSNCGCSCTPPPSTCPTTCLPIMTCTPPSPPACCNTCGTCNGKRRRRHLTMLSNATY 82
Query: 570 RATNVPISKL 599
A + ++++
Sbjct: 83 VADHEKVNRV 92
>U40030-1|AAR12977.1| 235|Caenorhabditis elegans Hypothetical
protein T13C2.4 protein.
Length = 235
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 232 KYPSGVEVKEGNELTPTLVKDEPSVKWD 315
++ G VK + L P+L E +V+WD
Sbjct: 3 QHAKGASVKRASNLPPSLFPPEETVRWD 30
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -1
Query: 152 DIALVKTLKLTIVATNILKKLCLKQMNNCVQVFVKVKVDARFSKQKV 12
++A+VKT K + I+K + + +MN Q+F K+D ++KV
Sbjct: 318 NLAIVKTEKRISMMAEIIKYIRIVKMNGWEQIF-SAKIDQFRKEEKV 363
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -1
Query: 152 DIALVKTLKLTIVATNILKKLCLKQMNNCVQVFVKVKVDARFSKQKV 12
++A+VKT K + I+K + + +MN Q+F K+D ++KV
Sbjct: 318 NLAIVKTEKRISMMAEIIKYIRIVKMNGWEQIF-SAKIDQFRKEEKV 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,756,487
Number of Sequences: 27780
Number of extensions: 355635
Number of successful extensions: 1085
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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