Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_N07
(584 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 231 1e-60
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 231 1e-60
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 231 1e-60
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 231 1e-60
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 231 1e-60
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 229 4e-60
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 218 1e-56
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 103 1e-36
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 54 5e-07
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 54 5e-07
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 51 3e-06
BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interactin... 31 2.3
AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting prote... 31 3.0
AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75 pro... 31 3.0
AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein. 31 3.0
AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein. 31 3.0
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 30 6.9
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 30 6.9
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 30 6.9
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 1e-60
Identities = 109/153 (71%), Positives = 127/153 (83%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 305
P KFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 306 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSM 485
LT+QNRQAQI VVPSA+ALII+ALKEPPRDR + ++++ IA+ M +RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 486 ARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 584
AR LSG+ KEILGTAQSVGC V+G PHD+IDD
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDD 154
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 1e-60
Identities = 109/153 (71%), Positives = 127/153 (83%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 305
P KFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 306 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSM 485
LT+QNRQAQI VVPSA+ALII+ALKEPPRDR + ++++ IA+ M +RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 486 ARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 584
AR LSG+ KEILGTAQSVGC V+G PHD+IDD
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDD 154
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 1e-60
Identities = 109/153 (71%), Positives = 127/153 (83%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 305
P KFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 306 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSM 485
LT+QNRQAQI VVPSA+ALII+ALKEPPRDR + ++++ IA+ M +RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 486 ARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 584
AR LSG+ KEILGTAQSVGC V+G PHD+IDD
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDD 154
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 1e-60
Identities = 109/153 (71%), Positives = 127/153 (83%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 305
P KFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 306 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSM 485
LT+QNRQAQI VVPSA+ALII+ALKEPPRDR + ++++ IA+ M +RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 486 ARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 584
AR LSG+ KEILGTAQSVGC V+G PHD+IDD
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDD 154
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 1e-60
Identities = 109/153 (71%), Positives = 127/153 (83%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 305
P KFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 306 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSM 485
LT+QNRQAQI VVPSA+ALII+ALKEPPRDR + ++++ IA+ M +RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 486 ARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 584
AR LSG+ KEILGTAQSVGC V+G PHD+IDD
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDD 154
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 229 bits (561), Expect = 4e-60
Identities = 108/153 (70%), Positives = 126/153 (82%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 305
P KFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 34 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 93
Query: 306 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSM 485
LT+QNRQAQI VVPSA+ALII+ALKEPPRDR + ++++ I + M +RS+
Sbjct: 94 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRSL 153
Query: 486 ARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 584
AR LSG+ KEILGTAQSVGC V+G PHD+IDD
Sbjct: 154 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDD 186
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 218 bits (532), Expect = 1e-56
Identities = 103/153 (67%), Positives = 124/153 (81%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 305
P KFDPNEIK+V LRC GEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 306 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSM 485
LT++NRQAQI VVPSA+A II+ALK+PPRDR + ++++ IA+ M +RS+
Sbjct: 62 LTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSL 121
Query: 486 ARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 584
AR LSG+ KEI GTAQS+GC V+G PHD+IDD
Sbjct: 122 ARELSGTIKEIPGTAQSMGCNVDGHHPHDIIDD 154
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 103 bits (246), Expect(2) = 1e-36
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = +3
Query: 333 IAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSMARYLSGSXK 512
I VVPSA+ALII+ALKEPPRDR + ++++ IA+ M +RS+AR LSG+ K
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIK 97
Query: 513 EILGTAQSVGCTVEGXPPHDLIDD 584
EILGTAQSVGC V+G PHD+IDD
Sbjct: 98 EILGTAQSVGCNVDGRHPHDIIDD 121
Score = 70.1 bits (164), Expect(2) = 1e-36
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 233
P KFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 53.6 bits (123), Expect = 5e-07
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -3
Query: 285 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 184
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 53.6 bits (123), Expect = 5e-07
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -3
Query: 285 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 184
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 50.8 bits (116), Expect = 3e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -3
Query: 285 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 184
PSSH PWQCHH PF TD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interacting
protein 5 (class I) protein.
Length = 652
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 293
E+G SSL K GP LG SP KA S W GL+
Sbjct: 475 ELGRRSSLGEKGGPILGASPHHSSSGEGKAKSSWFGLR 512
>AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting protein
Rip11a protein.
Length = 653
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 293
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75
protein.
Length = 549
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 293
E+G SSL K GP LG SP KA S W GL+
Sbjct: 372 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 409
>AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein.
Length = 522
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 293
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein.
Length = 733
Score = 31.1 bits (67), Expect = 3.0
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 293
E+G SSL K GP LG SP KA S W GL+
Sbjct: 556 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 593
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.9 bits (64), Expect = 6.9
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 141 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 263
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 250
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.9 bits (64), Expect = 6.9
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 141 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 263
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 243
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.9 bits (64), Expect = 6.9
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 141 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 263
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,507,846
Number of Sequences: 237096
Number of extensions: 1782154
Number of successful extensions: 3230
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3230
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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