Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_N07
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical pr... 216 8e-57
Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical p... 58 6e-09
AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine re... 29 3.2
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 28 5.6
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 28 5.6
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 28 5.6
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 28 5.6
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 28 5.6
AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin... 28 5.6
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 28 5.6
Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical
protein JC8.3a protein.
Length = 165
Score = 216 bits (528), Expect = 8e-57
Identities = 101/152 (66%), Positives = 123/152 (80%)
Frame = +3
Query: 126 PXKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 305
P KFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T +
Sbjct: 2 PPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTCK 61
Query: 306 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMXNRSM 485
LT+QNR A+I VVPSAA+LI++ LKEPPRDR +++ +I IA+IM RSM
Sbjct: 62 LTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRSM 121
Query: 486 ARYLSGSXKEILGTAQSVGCTVEGXPPHDLID 581
A+ L G+ KEILGTAQSVGCT++G PHD+I+
Sbjct: 122 AKKLEGTVKEILGTAQSVGCTIDGQHPHDIIE 153
>Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical
protein JC8.3c protein.
Length = 50
Score = 57.6 bits (133), Expect = 6e-09
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3
Query: 468 MXNRSMARYLSGSXKEILGTAQSVGCTVEGXPPHDLID 581
M RSMA+ L G+ KEILGTAQSVGCT++G PHD+I+
Sbjct: 1 MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIE 38
>AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine
receptor, class h protein37 protein.
Length = 345
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 544 HPTDCAVPRISFXEPERYRAIDL 476
HPT CAV F +P +Y IDL
Sbjct: 291 HPTACAVSLFLFYDPYQYYLIDL 313
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 404 LFTITRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLP 279
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIP 43
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 404 LFTITRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLP 279
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIP 43
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 404 LFTITRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLP 279
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIP 43
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 404 LFTITRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLP 279
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIP 43
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 404 LFTITRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLP 279
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIP 43
>AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin
protein 73 protein.
Length = 577
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 296 DLETLPVTCGLGNVITHLFRRQTKRTDFR 210
D ++LP+ C LG V+ + ++ TDFR
Sbjct: 386 DSQSLPIWCKLGKVVKYKYKVTPGWTDFR 414
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 404 LFTITRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLP 279
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIP 43
>Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical
protein C27H6.4b protein.
Length = 331
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 403 SXKISNTTATSPLRM*SELRRS*XTDQWPGTFLAX*KRFLAQHSQLDVLWR 555
S +S TTA S +L TD+ + A KR+ A +DVLWR
Sbjct: 94 SRSLSQTTAHSKTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWR 144
>Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical
protein C27H6.4a protein.
Length = 272
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 403 SXKISNTTATSPLRM*SELRRS*XTDQWPGTFLAX*KRFLAQHSQLDVLWR 555
S +S TTA S +L TD+ + A KR+ A +DVLWR
Sbjct: 35 SRSLSQTTAHSKTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWR 85
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 220 VLLVCLLKRWVMTL 261
+L++CLLKRW M L
Sbjct: 180 ILMICLLKRWKMNL 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,299,449
Number of Sequences: 27780
Number of extensions: 260862
Number of successful extensions: 620
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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