Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_N03
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    32   0.41 
U55369-2|AAK52183.2|  526|Caenorhabditis elegans Udp-glucuronosy...    32   0.41 
AF100663-2|AAC68981.2|  532|Caenorhabditis elegans Udp-glucurono...    31   0.71 
AC006807-4|AAK84618.1|  904|Caenorhabditis elegans Hypothetical ...    31   0.94 
AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical ...    31   0.94 
Z75529-1|CAA99782.1|  534|Caenorhabditis elegans Hypothetical pr...    29   3.8  
L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81084-4|CAB03109.2|  476|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41038-5|AAK29710.4|  519|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical protein
            C44B9.4 protein.
          Length = 1150

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +3

Query: 66   IIEKIRDY*S*LQDRTTSMRMEKALENLKTNPYYEKYANRIAELQNTSPEEFMERVEQC 242
            + +++RD    ++ + T M M++  E  K     E + NR A L   +PE++ E  EQC
Sbjct: 916  VTKQLRDEIKEIKLKYTKMMMDRGFEQAKD----EYFRNRDAALSKWTPEQWKEHNEQC 970


>U55369-2|AAK52183.2|  526|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein48 protein.
          Length = 526

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 126 MEKALENLKTNPYYEKYANRIAELQNTSPEEFMERV 233
           +E A++ +  NP Y++ ANR+ +L  + P+   ER+
Sbjct: 426 IEGAIKEILVNPTYQEKANRLKKLMRSKPQSASERL 461


>AF100663-2|AAC68981.2|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein19 protein.
          Length = 532

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
 Frame = +3

Query: 105 DRTTSMRMEKALENLKTNPYYEKYANRIAEL---QNTSPEE-FMERVE 236
           D + +  ++  +E +  NP Y K A R+AE+   Q T+P+E F++ VE
Sbjct: 418 DLSDAKLVQSTIEEVLNNPEYRKSAERVAEMLRNQPTNPKETFLKYVE 465


>AC006807-4|AAK84618.1|  904|Caenorhabditis elegans Hypothetical
           protein Y58A7A.4 protein.
          Length = 904

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 384 ELVIDKSSTEIKSIWEEYHQN---KEVISATIPVDVYSNIKETMNHFPVFL 527
           EL + KSS+E K    E  +N   +E I+  +P+D+ +   + M + P+F+
Sbjct: 548 ELFLIKSSSETKIKCTECLRNEFYREFIARRLPIDLQTETADEMEYLPIFI 598


>AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical
           protein Y58A7A.3 protein.
          Length = 883

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 384 ELVIDKSSTEIKSIWEEYHQN---KEVISATIPVDVYSNIKETMNHFPVFL 527
           EL + KSS+E K    E  +N   +E I+  +P+D+ +   + M + P+F+
Sbjct: 529 ELFLIKSSSETKIKCTECLRNEFYREFIARRLPIDLQTETADEMEYLPIFI 579


>Z75529-1|CAA99782.1|  534|Caenorhabditis elegans Hypothetical
           protein C44H9.1 protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +3

Query: 117 SMRMEKALENLKTNPYYEKYANRIAELQNTSPEEFMERV-EQCD 245
           S ++ +A++ +  NP Y+K A ++A + ++ P +  + V + CD
Sbjct: 425 SEKIREAIQTVMENPSYKKNAEKLANILSSQPHQPKDVVLKHCD 468


>L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical
           protein ZC262.3b protein.
          Length = 624

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = +3

Query: 378 KIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNHFPVFLFPLPRS 545
           ++E + +K +  ++ + + YHQ  E +  +     Y++ +E +NHF      +P+S
Sbjct: 550 QMESLHEKYTKRVQIVRDNYHQQVEALRVS-----YASQQEKLNHFVCLSITIPKS 600


>Z81084-4|CAB03109.2|  476|Caenorhabditis elegans Hypothetical
           protein F46A9.3a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +3

Query: 366 EDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNHFPVFL 527
           EDI K  L  D +S    SIWE    N+  I+    + V+  I  T+  F +FL
Sbjct: 19  EDILKAFLEEDFNSQHYDSIWECLQHNRRAIAVNGFIIVFLIIYTTIGGF-IFL 71


>U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical
           protein F46F11.9b protein.
          Length = 1282

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +3

Query: 282 SVDTRQFSSVLNPKQALGKEINVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNK 449
           S+ T +  +++N         N P + L DI K+E+   K+    + +W E  +N+
Sbjct: 594 SLQTERLRTIVNALDIYFPHRNEPVEMLTDIPKVEMETVKAIYGERPLWNEIDENE 649


>U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical
           protein F46F11.9a protein.
          Length = 1280

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +3

Query: 282 SVDTRQFSSVLNPKQALGKEINVPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNK 449
           S+ T +  +++N         N P + L DI K+E+   K+    + +W E  +N+
Sbjct: 592 SLQTERLRTIVNALDIYFPHRNEPVEMLTDIPKVEMETVKAIYGERPLWNEIDENE 647


>U41038-5|AAK29710.4|  519|Caenorhabditis elegans Hypothetical
           protein F59C12.3 protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/37 (21%), Positives = 21/37 (56%)
 Frame = +3

Query: 354 DKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISA 464
           +KK E++  +    D+   ++  +WEE H+  +++ +
Sbjct: 278 EKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVES 314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,976,037
Number of Sequences: 27780
Number of extensions: 316299
Number of successful extensions: 922
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)