Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_N02
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-8|CAA86746.1| 253|Caenorhabditis elegans Hypothetical pr... 118 3e-27
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 31 0.54
Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical p... 30 1.6
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 30 1.6
Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein. 28 6.6
Z78417-9|CAI70407.1| 700|Caenorhabditis elegans Hypothetical pr... 27 8.7
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 8.7
>Z46787-8|CAA86746.1| 253|Caenorhabditis elegans Hypothetical
protein C16C10.8 protein.
Length = 253
Score = 118 bits (285), Expect = 3e-27
Identities = 56/145 (38%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
Frame = +1
Query: 166 MVVFTCSHCGESVQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESHIKCITEEERY 345
MV F+C++CGE+ +K +VE+H L +CRN SC+DC + + Y+ H+KCITE ++Y
Sbjct: 1 MVFFSCNNCGEACKKNQVERH-LFQCRNTT--FSCIDCQLVYTRETYKDHVKCITENQKY 57
Query: 346 SGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINF 525
GK + KE KGE KQNAWV+ + ++ + V+ ++++++ N PRK+ KFINF
Sbjct: 58 GGKNYVEKENKGEAKQNAWVDQVNRAIEFVTDS--QVKELLKSVAGFANIPRKEAKFINF 115
Query: 526 VKNVCGHKTNPKDID-QAWEFISVK 597
+ N C + K++ +AW+ I+ +
Sbjct: 116 LTNSC--RLRDKNLALRAWQAIAAE 138
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 283 KDFLGKDYESHIKCITEEERYSGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRR 462
K+ K E H+ + E ++ K T K+++ EK + + Q+ D+QK + ++
Sbjct: 150 KEEKNKQREKHLATHKKAEEFARKVRTDKDEQREKHLDTHKKAEQNAQDDQKYHDEARKK 209
Query: 463 IIETISKHNNTPRKK 507
IET K K+
Sbjct: 210 YIETQKKAEENEEKR 224
>Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical
protein F11D11.6 protein.
Length = 141
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 207 LNRLPTMTACKNNHFL*NTCELGLFVLNAKCITLNF 100
L T+ CKN F+ N C L LFV++ KCI ++
Sbjct: 43 LTAFKTVGECKNGCFVKNDCFLALFVID-KCIFFSY 77
>Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 112 YTFCIQNK*PQFTRVLQEMVVFTCSHCGE-SVQKPKVEKHYLTKCRNKNPNLSCMDCFKD 288
YTF N ++T +LQ+ TC CG S P T+C N N C + D
Sbjct: 115 YTFLCSNA--KYTPLLQQFCAKTCGFCGSGSTAAPVACVDTSTQCAYWNKNGFCSSIYYD 172
>Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 112 YTFCIQNK*PQFTRVLQEMVVFTCSHCGE-SVQKPKVEKHYLTKCRNKNPNLSCMDCFKD 288
YTF N ++T +LQ+ TC CG S P T+C N N C + D
Sbjct: 115 YTFLCSNA--KYTPLLQQFCAKTCGFCGSGSTAAPVACVDTSTQCAYWNKNGFCSSIYYD 172
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 184 SHCGESVQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESH 315
S+ G+ V+ ++ K + +C N N +L C+ C + G++ H
Sbjct: 37 SNRGKVVKNQEIIKTFCDECDNCNKSLMCLTCGRILCGRNDSGH 80
>Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical
protein C08B11.8 protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 195 PTMTACKNNHFL*NTCELGLFVLNAKCITLNFKMI 91
P++ N HF N+ LGLF+ +T NF +I
Sbjct: 192 PSLLVIDNGHFQYNSISLGLFLATYMFLTKNFTII 226
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 179 HAVIVGSLFRSPKWKSIISLNVGIKIQICHVWTVSKIF*EKIMNRISSALLKKKDT 346
H +V L + K K+I S G + V T SK F + N I+ A++KKKD+
Sbjct: 28 HQYLVKVLTKDTKLKNI-STCTGTLLSPSVVLTSSKCFPDTRKNLIAQAIIKKKDS 82
>Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical
protein C17E4.10 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.6
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +1
Query: 193 GESVQKPKVEKHYLTKCRNKN-PNLSCMDCFKDFLGKDYESHIKCITEEERYSGKGFTAK 369
G + P+ E+ L K+ P LS F DF + E EE+ + T +
Sbjct: 80 GAPIATPEDEEQLLDDLEIKSAPLLSPRRTFADFEDRSSEEKENRRIEEDDDTEADTTIR 139
Query: 370 EKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINFVKN 534
E+ +K+ + VL E+K + +ET+ +H + P FI V++
Sbjct: 140 EEFDYEKE-------EEVLKEEKIID---KPNVETVEEHKENKNESPDFIRMVES 184
>Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical
protein F43G9.11 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 175 FTCSHCGES-VQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDY 306
F+C+HCG+S + + H LT +K C C + F + Y
Sbjct: 219 FSCAHCGKSFADRSNLRAHMLTHTGDK--RFECDKCGRRFALRAY 261
>AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 175 FTCSHCGES-VQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDY 306
F+C+HCG+S + + H LT +K C C + F + Y
Sbjct: 219 FSCAHCGKSFADRSNLRAHMLTHTGDK--RFECDKCGRRFALRAY 261
>Z78417-9|CAI70407.1| 700|Caenorhabditis elegans Hypothetical
protein C35C5.11 protein.
Length = 700
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 26 KSLQKYKTVIHKITYTSENQILIILKFKVIHFAFKTNSPNSH 151
K+ +KT+I I +TS Q+ +I+ +I + F+ S + H
Sbjct: 477 KTFLPHKTIIPHIHFTSFQQVAVIICLSLIIWVFRWFSLSHH 518
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 181 CSHCGESVQKPKVEKHYLTKCRNKNPNLSC 270
CS C +S Q+ V++ Y + N++ NL C
Sbjct: 179 CSQCQQSCQQQCVQQQYSVQQCNQHCNLEC 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,585,282
Number of Sequences: 27780
Number of extensions: 347806
Number of successful extensions: 1239
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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