Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_M14
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 77 3e-15
U80025-2|AAD32270.3| 806|Caenorhabditis elegans Hypothetical pr... 28 2.5
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 28 2.5
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 28 2.5
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 28 2.5
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 28 2.5
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 28 2.5
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 28 2.5
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 28 2.5
Z73098-12|CAA97339.1| 452|Caenorhabditis elegans Hypothetical p... 27 3.4
AF022985-6|AAB69963.1| 457|Caenorhabditis elegans Hypothetical ... 27 3.4
U58752-4|AAB00667.1| 572|Caenorhabditis elegans Hypothetical pr... 27 4.5
U20861-9|AAN84854.1| 192|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 26 7.8
Z75710-1|CAB00023.1| 327|Caenorhabditis elegans Hypothetical pr... 26 7.8
U22831-12|AAL65784.1| 614|Caenorhabditis elegans G-protein-link... 26 7.8
U22831-11|AAL65783.1| 627|Caenorhabditis elegans G-protein-link... 26 7.8
U22831-10|AAM98012.1| 667|Caenorhabditis elegans G-protein-link... 26 7.8
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 26 7.8
AY053365-1|AAL15153.1| 627|Caenorhabditis elegans G-protein-lin... 26 7.8
AY053364-1|AAL15152.1| 664|Caenorhabditis elegans G-protein-lin... 26 7.8
AF272738-1|AAK94896.1| 614|Caenorhabditis elegans G protein-lin... 26 7.8
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 77.4 bits (182), Expect = 3e-15
Identities = 52/124 (41%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Frame = +1
Query: 22 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVSFTWWKY*VPCAAS 201
MGISRD WHKR TG + KKRK+ELGRPAANT++G R+ V
Sbjct: 1 MGISRDSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHRVRLVR-------TRGGNE 53
Query: 202 GHR*LLLGIGMFNSQNPYH*CCV*CI*QM-----NWCVQ-RPLVKNAIVVVXATPFRQWY 363
+R L L G F+ + + M N V+ + LVK AI+ V A PFRQWY
Sbjct: 54 KYRALRLDSGNFSWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWY 113
Query: 364 ESHY 375
E+HY
Sbjct: 114 EAHY 117
Score = 73.3 bits (172), Expect = 5e-14
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +2
Query: 161 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN 283
R+RGGN KYRALRLD+GNFSW SE +TRKTRI+D +YNA+N
Sbjct: 47 RTRGGNEKYRALRLDSGNFSWASEQTTRKTRIVDTMYNATN 87
>U80025-2|AAD32270.3| 806|Caenorhabditis elegans Hypothetical
protein F02C9.2 protein.
Length = 806
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 255 SLMLCIMHLTNELVRTKTLGQE 320
S+ CI+ L N+LV K LG+E
Sbjct: 368 SIQSCIVQLANDLVEVKLLGEE 389
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 191 ALRLDTGNFSWGSECSTRKTRIIDVVYN 274
A+++D G+F+WGS+ RK + D+ +N
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFN 638
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 191 ALRLDTGNFSWGSECSTRKTRIIDVVYN 274
A+++D G+F+WGS+ RK + D+ +N
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFN 638
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 191 ALRLDTGNFSWGSECSTRKTRIIDVVYN 274
A+++D G+F+WGS+ RK + D+ +N
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFN 638
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 191 ALRLDTGNFSWGSECSTRKTRIIDVVYN 274
A+++D G+F+WGS+ RK + D+ +N
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFN 638
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 191 ALRLDTGNFSWGSECSTRKTRIIDVVYN 274
A+++D G+F+WGS+ RK + D+ +N
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFN 638
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 286 MNWCVQRPLVKNAIVVVXATPFRQWYES 369
M+W V++ L ++ A P+RQWY S
Sbjct: 697 MDWHVKQNLARHGSNNSAAVPYRQWYPS 724
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 191 ALRLDTGNFSWGSECSTRKTRIIDVVYN 274
A+++D G+F+WGS+ RK + D+ +N
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFN 638
>Z73098-12|CAA97339.1| 452|Caenorhabditis elegans Hypothetical
protein T21C9.12 protein.
Length = 452
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1
Query: 357 LPEWSCXYYNNCILDQGSLYAPIHLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYL 181
+PEW + ++D L IHL DA M++ ++ DP ++ RR A YL
Sbjct: 365 VPEWKGNMDDTSLVDLAELLKTIHLSDAEDVRPMLQYYS-QYDDPAKEF---RRRAVYL 419
>AF022985-6|AAB69963.1| 457|Caenorhabditis elegans Hypothetical
protein T15B7.7 protein.
Length = 457
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 267 CIMHLTNELVRTKTLGQE 320
CI+ +TN+LV+ K LG+E
Sbjct: 141 CIIEMTNDLVKKKLLGKE 158
>U58752-4|AAB00667.1| 572|Caenorhabditis elegans Hypothetical
protein B0218.1a protein.
Length = 572
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = -2
Query: 356 CLNGVAXTTTIAFLTKGL--CTHQFIC*MHYTQHQ*YGFCELNIPIPKRSYRCPDAAHGT 183
CL TT F+ T I HY + FC+ N+P SY C + GT
Sbjct: 141 CLKVKGYDTTRGFVQDAYHPATEDSIQVEHYKKLGLIPFCQTNVPQSLLSYNCSNPLFGT 200
>U20861-9|AAN84854.1| 192|Caenorhabditis elegans Hypothetical
protein C28H8.9b protein.
Length = 192
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +1
Query: 13 PTKMGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTR 132
P + G D W R+ G P++K A NT+
Sbjct: 149 PDEFGSDEDDWSSRKRRKGNLGPVQKATSSRKKNAARNTK 188
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 174 PPRERNGVDTLRTEPGVCSGTP 109
PPRERN VDT P TP
Sbjct: 483 PPRERNMVDTAPNTPQSMQRTP 504
>Z75710-1|CAB00023.1| 327|Caenorhabditis elegans Hypothetical
protein D1081.2 protein.
Length = 327
Score = 26.2 bits (55), Expect = 7.8
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = -1
Query: 207 VSRRSARYLVFPPRERNGVDTLRTEPGVCSGTP*LILPLLAYGRTFPTGGPSLMPVIPTN 28
++ + RY F R + G+ E +GT ++L G + P L P+I ++
Sbjct: 55 INNKLRRYTTFSKR-KTGIMKKAFELSTLTGTQVMLLVASETGHVYTYATPKLQPMISSD 113
Query: 27 T 25
T
Sbjct: 114 T 114
>U22831-12|AAL65784.1| 614|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 2, isoform b protein.
Length = 614
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 313 PRVFVRTNSFVRCIIHNINDTGFAS*TFRSPREVTGVQTQRT 188
P V VRT+ + NDT +S FR+ T VQT +T
Sbjct: 220 PEVSVRTSDAGNSSSDSPNDTSNSSKCFRTAPPTTTVQTTQT 261
>U22831-11|AAL65783.1| 627|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 2, isoform a protein.
Length = 627
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 313 PRVFVRTNSFVRCIIHNINDTGFAS*TFRSPREVTGVQTQRT 188
P V VRT+ + NDT +S FR+ T VQT +T
Sbjct: 220 PEVSVRTSDAGNSSSDSPNDTSNSSKCFRTAPPTTTVQTTQT 261
>U22831-10|AAM98012.1| 667|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 2, isoform c protein.
Length = 667
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 313 PRVFVRTNSFVRCIIHNINDTGFAS*TFRSPREVTGVQTQRT 188
P V VRT+ + NDT +S FR+ T VQT +T
Sbjct: 220 PEVSVRTSDAGNSSSDSPNDTSNSSKCFRTAPPTTTVQTTQT 261
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 174 PPRERNGVDTLRTEPGVCSGTP 109
PPRERN VDT P TP
Sbjct: 483 PPRERNMVDTAPNTPQSMQRTP 504
>AY053365-1|AAL15153.1| 627|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor GAR-2b protein.
Length = 627
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 313 PRVFVRTNSFVRCIIHNINDTGFAS*TFRSPREVTGVQTQRT 188
P V VRT+ + NDT +S FR+ T VQT +T
Sbjct: 220 PEVSVRTSDAGNSSSDSPNDTSNSSKCFRTAPPTTTVQTTQT 261
>AY053364-1|AAL15152.1| 664|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor GAR-2a protein.
Length = 664
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 313 PRVFVRTNSFVRCIIHNINDTGFAS*TFRSPREVTGVQTQRT 188
P V VRT+ + NDT +S FR+ T VQT +T
Sbjct: 220 PEVSVRTSDAGNSSSDSPNDTSNSSKCFRTAPPTTTVQTTQT 261
>AF272738-1|AAK94896.1| 614|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-2c protein.
Length = 614
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 313 PRVFVRTNSFVRCIIHNINDTGFAS*TFRSPREVTGVQTQRT 188
P V VRT+ + NDT +S FR+ T VQT +T
Sbjct: 220 PEVSVRTSDAGNSSSDSPNDTSNSSKCFRTAPPTTTVQTTQT 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,107,619
Number of Sequences: 27780
Number of extensions: 222593
Number of successful extensions: 638
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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