Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_M11
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 177 4e-45
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 30 0.95
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 30 1.3
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical ... 29 2.2
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 28 5.1
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 28 5.1
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 28 5.1
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 28 5.1
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 28 5.1
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z66519-13|CAI46547.1| 281|Caenorhabditis elegans Hypothetical p... 27 8.9
Z66519-12|CAA91376.2| 288|Caenorhabditis elegans Hypothetical p... 27 8.9
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 27 8.9
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 27 8.9
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 27 8.9
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 27 8.9
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 27 8.9
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 27 8.9
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 177 bits (431), Expect = 4e-45
Identities = 91/162 (56%), Positives = 110/162 (67%), Gaps = 2/162 (1%)
Frame = +1
Query: 40 MTNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHG 219
MTNSKG R HG LSTY YK GD+VDI+ NGA QKGMP K YHG
Sbjct: 1 MTNSKGLR-RGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHG 59
Query: 220 KTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEA 399
+TGR++NVT A+G+IVNKRVRG I+PKRINIR+EH+K SKCR DFL RVK N+ K A
Sbjct: 60 RTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAA 119
Query: 400 KAAGKTV-NLKRQPAPPKAAH-IVSGTEKPVLLAPIPYEFVA 519
K+AG+ V LKR P P+ AH + + +P LLAP+ +E VA
Sbjct: 120 KSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIVA 161
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 144 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCDCQQAC 281
Q RHC Q C S Y W+ RSRV +C+ + Q C
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQIC 411
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +1
Query: 28 QGSKMTNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGN-GAVQKGMPH 204
Q T S GY P + +AG T GT+ + + G ++ GN G + +
Sbjct: 110 QNQNQTQSGGYYPNNLNGGVVAGGATTGTVVIGGVTQQVTQGGQPNVGGNVGGQNQNVGG 169
Query: 205 KVYHGKTGRVYNVTAHALGVIVNK 276
V + N +A GV+ N+
Sbjct: 170 VVGDQNQNQYQNQNINAAGVVGNQ 193
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +1
Query: 28 QGSKMTNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGN-GAVQKGMPH 204
Q T S GY P + +AG T GT+ + + G ++ GN G + +
Sbjct: 105 QNQNQTQSGGYYPNNLNGGVVAGGATTGTVVIGGVTQQVTQGGQPNVGGNVGGQNQNVGG 164
Query: 205 KVYHGKTGRVYNVTAHALGVIVNK 276
V + N +A GV+ N+
Sbjct: 165 VVGDQNQNQYQNQNINAAGVVGNQ 188
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +1
Query: 28 QGSKMTNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGN-GAVQKGMPH 204
Q T S GY P + +AG T GT+ + + G ++ GN G + +
Sbjct: 128 QNQNQTQSGGYYPNNLNGGVVAGGATTGTVVIGGVTQQVTQGGQPNVGGNVGGQNQNVGG 187
Query: 205 KVYHGKTGRVYNVTAHALGVIVNK 276
V + N +A GV+ N+
Sbjct: 188 VVGDQNQNQYQNQNINAAGVVGNQ 211
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 421 NLKRQPAPPKAAHIVSGTE 477
NL+R+PAPPK H+ S E
Sbjct: 462 NLRRRPAPPKQNHVASPAE 480
>AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical
protein Y80D3A.9 protein.
Length = 279
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 486 DGFLSSTDDVGSFRGSWLSLQVDGLAGSL 400
DG LS D+ RG+WL + G G L
Sbjct: 39 DGMLSGVDEKDVARGTWLGMDAHGKVGML 67
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 319 VEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVN-LKRQPAPPKAAHIVSGTEKPVLLA 495
VE+V + K+N++ K++++ T ++ PAPP+ +V EKPV A
Sbjct: 361 VENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVEKVEKPV--A 418
Query: 496 PI 501
P+
Sbjct: 419 PV 420
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 381 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 226
LILFD+LK VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 381 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 226
LILFD+LK VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical
protein R186.1 protein.
Length = 276
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 486 DGFLSSTDDVGSFRGSWLSLQVDGLAGSL 400
DG LS D + RG+WL L +G G +
Sbjct: 39 DGILSGVDKQENARGTWLGLNENGRIGMM 67
>Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical
protein D1086.1 protein.
Length = 181
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 201 TQSIPW--KDRSRVQRDCSCSRCDCQQACSRKDYTEA 305
T+ + W D+SR+ D C++ ++ C KD+ +A
Sbjct: 120 TECVQWYFSDKSRMSTDQKCAQFKAKKQCIEKDFGKA 156
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 91 AGSXTHGTIPLSTYMKVYKVGDIVDI-RGNGA 183
AGS H PL K+YK G I I RG GA
Sbjct: 140 AGSGVHYDGPLDVVKKLYKQGGISSIYRGTGA 171
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 91 AGSXTHGTIPLSTYMKVYKVGDIVDI-RGNGA 183
AGS H PL K+YK G I I RG GA
Sbjct: 140 AGSGVHYDGPLDVVKKLYKQGGISSIYRGTGA 171
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +3
Query: 237 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 416
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 417 RQPEETAS 440
Q S
Sbjct: 92 CQSAPAVS 99
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +3
Query: 237 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 416
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 417 RQPEETAS 440
Q S
Sbjct: 92 CQSAPAVS 99
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 91 AGSXTHGTIPLSTYMKVYKVGDIVDI-RGNGA 183
AGS H PL K+YK G I I RG GA
Sbjct: 140 AGSGVHYDGPLDVVKKLYKQGGISSIYRGTGA 171
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 237 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 332
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 237 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 332
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>Z66519-13|CAI46547.1| 281|Caenorhabditis elegans Hypothetical
protein B0334.2b protein.
Length = 281
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = -2
Query: 225 CLSMVYFVWHTLLNCTIASDVYN--VSNFVHFHVRGERNSSMCAGTCERTSTL 73
C + Y VW T+LN + S V N F RG M G C S +
Sbjct: 183 CKVITYLVWGTILNIMLISYVTNWFTQLFARQPFRGTDVEVMIGGQCITVSEI 235
>Z66519-12|CAA91376.2| 288|Caenorhabditis elegans Hypothetical
protein B0334.2a protein.
Length = 288
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = -2
Query: 225 CLSMVYFVWHTLLNCTIASDVYN--VSNFVHFHVRGERNSSMCAGTCERTSTL 73
C + Y VW T+LN + S V N F RG M G C S +
Sbjct: 190 CKVITYLVWGTILNIMLISYVTNWFTQLFARQPFRGTDVEVMIGGQCITVSEI 242
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/72 (22%), Positives = 29/72 (40%)
Frame = +1
Query: 295 IPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 474
+P R+ V+ + ++ +R KE+E + + + + R P PP I
Sbjct: 207 LPPTPPARITSVRSDESIEEEERRRKESEETASFEELEAEIMRISRSPVPPPVLSIPPPP 266
Query: 475 EKPVLLAPIPYE 510
+ L IP E
Sbjct: 267 PPNIPLPTIPQE 278
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/72 (22%), Positives = 29/72 (40%)
Frame = +1
Query: 295 IPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 474
+P R+ V+ + ++ +R KE+E + + + + R P PP I
Sbjct: 207 LPPTPPARITSVRSDESIEEEERRRKESEETASFEELEAEIMRISRSPVPPPVLSIPPPP 266
Query: 475 EKPVLLAPIPYE 510
+ L IP E
Sbjct: 267 PPNIPLPTIPQE 278
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 237 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 416
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 417 RQPEETAS 440
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 237 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 416
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 417 RQPEETAS 440
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 237 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 416
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 417 RQPEETAS 440
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 237 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 416
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 417 RQPEETAS 440
Q + AS
Sbjct: 89 CQQQCQAS 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,196,078
Number of Sequences: 27780
Number of extensions: 255831
Number of successful extensions: 982
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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