Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_M04
         (369 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019062-1|AAH19062.1|  456|Homo sapiens proteasome (prosome, ma...   144   1e-34
AK222679-1|BAD96399.1|  456|Homo sapiens proteasome 26S non-ATPa...   144   1e-34
AB003103-1|BAA19749.1|  456|Homo sapiens 26S proteasome subunit ...   144   1e-34
BC065826-1|AAH65826.1|  397|Homo sapiens proteasome (prosome, ma...    81   1e-15
BC146810-1|AAI46811.1| 1099|Homo sapiens NOL8 protein protein.         29   6.2  
AL136097-11|CAI16206.1| 1099|Homo sapiens nucleolar protein 8 pr...    29   6.2  
AL136097-10|CAI16205.1|  794|Homo sapiens nucleolar protein 8 pr...    29   6.2  
AK024245-1|BAB14857.1|  858|Homo sapiens protein ( Homo sapiens ...    29   6.2  
AK022755-1|BAB14229.1|  846|Homo sapiens protein ( Homo sapiens ...    29   6.2  
AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.               29   6.2  
AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8 pro...    29   6.2  

>BC019062-1|AAH19062.1|  456|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 12 protein.
          Length = 456

 Score =  144 bits (348), Expect = 1e-34
 Identities = 69/108 (63%), Positives = 87/108 (80%)
 Frame = +3

Query: 39  GGLDASGKIIKMEVDYSATCDEKLPLWKSWAAQGKIQEAIDQLLALEKQTRTGADMVSTS 218
           G   A G+I+KMEVDYSAT D++LP     A +G++QE I+ LL+LEKQTRT +DMVSTS
Sbjct: 5   GSERADGRIVKMEVDYSATVDQRLPECAKLAKEGRLQEVIETLLSLEKQTRTASDMVSTS 64

Query: 219 RILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYV 362
           RILV VV++ +EAK W  LN++I++LSKRRSQLKQAV KMVQ+C TYV
Sbjct: 65  RILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYV 112


>AK222679-1|BAD96399.1|  456|Homo sapiens proteasome 26S non-ATPase
           subunit 12 isoform 1 variant protein.
          Length = 456

 Score =  144 bits (348), Expect = 1e-34
 Identities = 69/108 (63%), Positives = 87/108 (80%)
 Frame = +3

Query: 39  GGLDASGKIIKMEVDYSATCDEKLPLWKSWAAQGKIQEAIDQLLALEKQTRTGADMVSTS 218
           G   A G+I+KMEVDYSAT D++LP     A +G++QE I+ LL+LEKQTRT +DMVSTS
Sbjct: 5   GSERADGRIVKMEVDYSATVDQRLPECAKLAKEGRLQEVIETLLSLEKQTRTASDMVSTS 64

Query: 219 RILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYV 362
           RILV VV++ +EAK W  LN++I++LSKRRSQLKQAV KMVQ+C TYV
Sbjct: 65  RILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYV 112


>AB003103-1|BAA19749.1|  456|Homo sapiens 26S proteasome subunit p55
           protein.
          Length = 456

 Score =  144 bits (348), Expect = 1e-34
 Identities = 69/108 (63%), Positives = 87/108 (80%)
 Frame = +3

Query: 39  GGLDASGKIIKMEVDYSATCDEKLPLWKSWAAQGKIQEAIDQLLALEKQTRTGADMVSTS 218
           G   A G+I+KMEVDYSAT D++LP     A +G++QE I+ LL+LEKQTRT +DMVSTS
Sbjct: 5   GSERADGRIVKMEVDYSATVDQRLPECAKLAKEGRLQEVIETLLSLEKQTRTASDMVSTS 64

Query: 219 RILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYV 362
           RILV VV++ +EAK W  LN++I++LSKRRSQLKQAV KMVQ+C TYV
Sbjct: 65  RILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYV 112


>BC065826-1|AAH65826.1|  397|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 12 protein.
          Length = 397

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = +3

Query: 204 MVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYTYV 362
           MVSTSRILV VV++ +EAK W  LN++I++LSKRRSQLKQAV KMVQ+C TYV
Sbjct: 1   MVSTSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYV 53


>BC146810-1|AAI46811.1| 1099|Homo sapiens NOL8 protein protein.
          Length = 1099

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/57 (22%), Positives = 31/57 (54%)
 Frame = +3

Query: 159 DQLLALEKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAV 329
           D+++A++K      +    S++  +  +  F+ +    L+DH + L KR+S ++ A+
Sbjct: 314 DEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESAL 370


>AL136097-11|CAI16206.1| 1099|Homo sapiens nucleolar protein 8
           protein.
          Length = 1099

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/57 (22%), Positives = 31/57 (54%)
 Frame = +3

Query: 159 DQLLALEKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAV 329
           D+++A++K      +    S++  +  +  F+ +    L+DH + L KR+S ++ A+
Sbjct: 314 DEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESAL 370


>AL136097-10|CAI16205.1|  794|Homo sapiens nucleolar protein 8
           protein.
          Length = 794

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/57 (22%), Positives = 31/57 (54%)
 Frame = +3

Query: 159 DQLLALEKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAV 329
           D+++A++K      +    S++  +  +  F+ +    L+DH + L KR+S ++ A+
Sbjct: 256 DEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESAL 312


>AK024245-1|BAB14857.1|  858|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14183 fis, clone NT2RP2004920, weakly similar to
           TRANSCRIPTIONAL REGULATOR ATRX. ).
          Length = 858

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/57 (22%), Positives = 31/57 (54%)
 Frame = +3

Query: 159 DQLLALEKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAV 329
           D+++A++K      +    S++  +  +  F+ +    L+DH + L KR+S ++ A+
Sbjct: 73  DEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESAL 129


>AK022755-1|BAB14229.1|  846|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12693 fis, clone NT2RP1000324. ).
          Length = 846

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/57 (22%), Positives = 31/57 (54%)
 Frame = +3

Query: 159 DQLLALEKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAV 329
           D+++A++K      +    S++  +  +  F+ +    L+DH + L KR+S ++ A+
Sbjct: 256 DEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESAL 312


>AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.
          Length = 1167

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/57 (22%), Positives = 31/57 (54%)
 Frame = +3

Query: 159 DQLLALEKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAV 329
           D+++A++K      +    S++  +  +  F+ +    L+DH + L KR+S ++ A+
Sbjct: 382 DEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESAL 438


>AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8
           protein.
          Length = 1167

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/57 (22%), Positives = 31/57 (54%)
 Frame = +3

Query: 159 DQLLALEKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAV 329
           D+++A++K      +    S++  +  +  F+ +    L+DH + L KR+S ++ A+
Sbjct: 382 DEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESAL 438


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,999,406
Number of Sequences: 237096
Number of extensions: 992336
Number of successful extensions: 2705
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2705
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)