Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_L21
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    71   5e-13
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81123-2|CAB03365.1|  734|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin ...    27   8.7  
AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical ...    27   8.7  
AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine re...    27   8.7  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 46/144 (31%), Positives = 67/144 (46%)
 Frame = +3

Query: 216 EAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGT 395
           + + +LP NV++R+ AL+ LQ + + IE+ FY  VH                R  IV G 
Sbjct: 17  DMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGE 76

Query: 396 YEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNI 575
            EP  ++   P  +  E ++LA                 KA E   DP+ KGI DFW   
Sbjct: 77  VEPTKEQIDTPILEGLEGDQLAELY--------------KAAE--ADPSAKGIKDFWLTA 120

Query: 576 FRNVSMLSEMMQEHDEPILKCLQD 647
            R   +++E ++EHD PIL  L D
Sbjct: 121 LRTHDLVAEAIEEHDVPILSYLTD 144


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 329 ECMYFTVKLGLNVDKLLLKSSQGADSPTNI 240
           EC++ + K GLNVDK+L        +PT I
Sbjct: 188 ECLHISAKSGLNVDKVLEAIIDRVPAPTAI 217


>Z81123-2|CAB03365.1|  734|Caenorhabditis elegans Hypothetical
           protein T14D7.2 protein.
          Length = 734

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = -3

Query: 452 FFFSVITPWVETFIIIRFICAIHNKSSLFIKRLVKFFI---FAFECMYFTVKLGLNVDKL 282
           + F +I P V T++++ F    + +  LFI   V+  I   FA  C   +    LN+++L
Sbjct: 648 YLFHMI-PVVLTYMLVPFPIYFNTQIPLFIHCFVQLLITYFFAIICTMVSELPALNIERL 706

Query: 281 LLKS 270
           LL S
Sbjct: 707 LLAS 710


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 423 NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMD 536
           +P RD+  EE LA+ ++  A   GE+++ +   EP  D
Sbjct: 6   DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43


>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
           protein T24A11.1b protein.
          Length = 1006

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 429 WRDDTEEEELARAVQNAAITEGEEKK 506
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 337 WRNPTDEKIIEEAVKASRI-EGEEKK 361


>Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical
           protein T24A11.1a protein.
          Length = 938

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 429 WRDDTEEEELARAVQNAAITEGEEKK 506
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 333 WRNPTDEKIIEEAVKASRI-EGEEKK 357


>AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin
           homologous protein 1 protein.
          Length = 930

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 429 WRDDTEEEELARAVQNAAITEGEEKK 506
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 337 WRNPTDEKIIEEAVKASRI-EGEEKK 361


>AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical
           protein Y51H7BM.1 protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 576 ICCTKSLGYPLHW 538
           +CC K LGYP +W
Sbjct: 52  LCCEKELGYPSNW 64


>AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein100 protein.
          Length = 361

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 95  RMCGRHQNVRXVPIFNISLSP 33
           ++C ++QN   VP F+++LSP
Sbjct: 179 QVCAQYQNTNNVPKFSVALSP 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,131,254
Number of Sequences: 27780
Number of extensions: 275008
Number of successful extensions: 967
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)