Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_L13
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    25   0.63 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.6  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   4.5  

>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
 Frame = +2

Query: 509 SGGAKKIVTNKLEWN-----AKSKVGSLQNASYKPGGGDKKIETVKLDFG 643
           +GG +K +  K ++      A +K+G  +  + +  GG+KK   ++LD G
Sbjct: 14  TGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTG 63


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 80  PTLLSLHYLTLRGPG 36
           P   SLHYL + GPG
Sbjct: 517 PNEKSLHYLHIAGPG 531


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 80  PTLLSLHYLTLRGPG 36
           P   SLHYL + GPG
Sbjct: 517 PNEKSLHYLHIAGPG 531


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 125 DSGVDESTQGNDLNGSPSSPNKKI 196
           DSG+DE  + +  NG     N+K+
Sbjct: 36  DSGIDEKKEDDFRNGIIDVENEKV 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,405
Number of Sequences: 438
Number of extensions: 3817
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)