Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_L04
(457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 100 6e-22
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 97 4e-21
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 45 3e-05
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 44 4e-05
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 40 0.001
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.004
03_01_0249 - 1935355-1935827,1936129-1936330 34 0.062
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.19
11_06_0584 - 25220371-25222917 30 1.0
02_04_0633 - 24616563-24617279 30 1.0
10_08_0710 + 20070655-20070990,20071074-20071469 29 1.3
03_05_0793 + 27755704-27756386,27756473-27757274,27757379-277576... 29 1.8
01_01_0735 + 5730783-5733320 29 1.8
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 2.3
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 4.1
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 27 7.2
04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260 27 9.5
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 27 9.5
01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294 27 9.5
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 100 bits (239), Expect = 6e-22
Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 13/159 (8%)
Frame = +3
Query: 3 LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKV 182
L+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG V
Sbjct: 566 LHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGPV 625
Query: 183 LLTESNAIAYYVANES-------------LRGGDLATQARVWQWASWSDSELLPASCAWV 323
ESNAIA YV + S L G L A + QW +S +E+ + W+
Sbjct: 626 F--ESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWL 683
Query: 324 FPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLL 440
FP LG + + E A + L +L L+ HL + T+L+
Sbjct: 684 FPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLV 722
Score = 94.3 bits (224), Expect = 4e-20
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Frame = +3
Query: 21 NFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESN 200
N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG V ESN
Sbjct: 11 NKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGPVF--ESN 68
Query: 201 AIAYYV-------------ANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGI 341
AIA YV A+ L G L A + QW +S +E+ W++P LGI
Sbjct: 69 AIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGI 128
Query: 342 MQFNKQNVERAKSDLLAALKVLDGHLLTRTFLL 440
+ + E A + L +L L+ HL + T+L+
Sbjct: 129 APYVAVSEEAAIAALKRSLGALNTHLASNTYLV 161
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 97.5 bits (232), Expect = 4e-21
Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Frame = +3
Query: 21 NFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESN 200
N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+P E+ +G V ESN
Sbjct: 35 NKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGAVF--ESN 92
Query: 201 AIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVE 368
AIA YVA N SL G L + + QW +S +E+ W++P LG + E
Sbjct: 93 AIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEE 152
Query: 369 RAKSDLLAALKVLDGHLLTRTFLL 440
A + L +L L+ HL + T+L+
Sbjct: 153 FAITSLKRSLGALNTHLASNTYLV 176
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 44.8 bits (101), Expect = 3e-05
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +3
Query: 42 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 218
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
Query: 219 AN-----ESLRGGDLATQARVWQW 275
+ LR G+L A V W
Sbjct: 75 LRNYNKPDLLREGNLEESAMVDMW 98
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 44.4 bits (100), Expect = 4e-05
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Frame = +3
Query: 36 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 212
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 213 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFN 353
Y+ + LR D+ A V W + PA C +FP + + N
Sbjct: 74 YILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTN 132
Query: 354 KQNVERAKSDLLAALKVLDGHLLTRTFL 437
+Q V + L L+ + L +L
Sbjct: 133 QQVVHESLEKLKKVLETYEARLSGSRYL 160
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 36 KALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYY 215
+ L+ + G + +V P + +K + + P G+VPAFE DG + L ES AI+ Y
Sbjct: 17 RILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE--DGDLTLFESRAISKY 74
Query: 216 V----ANESLRGGDLATQARVWQWASWSDSELLPASCAWVF 326
+ ++ LR +L+ A V W S A +F
Sbjct: 75 ILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIF 115
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +3
Query: 36 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 212
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 213 YVANES--------LRGGDLATQARVWQW 275
Y+ + LR GD + A V W
Sbjct: 74 YILRKHRATDEANLLREGDPSESAVVDAW 102
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.9 bits (74), Expect = 0.062
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 108 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQAR 263
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G+ R
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGR 91
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.19
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 179
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 180 VLLTESNAIAYYVANE 227
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>11_06_0584 - 25220371-25222917
Length = 848
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 436 KXVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 284
K R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 390 KTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>02_04_0633 - 24616563-24617279
Length = 238
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 199 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTVNYC 303
MP+ TT+ M+ S + W P+ G HG VN+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHG--VNWC 33
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 1.3
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +3
Query: 108 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 269
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 270 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 410
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>03_05_0793 +
27755704-27756386,27756473-27757274,27757379-27757634,
27758355-27758566,27760494-27760709
Length = 722
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 294 ELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLLPKKST 455
E L A FPYL + Q + A +DLLAA ++++ T+ F+L ++T
Sbjct: 144 EALVAFLVACFPYLPTWEA-LQYLRLANADLLAAARLVEEDRNTKAFILASRTT 196
>01_01_0735 + 5730783-5733320
Length = 845
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 83 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKSA 184
T F +W D + + +E SC+K C+ C K+A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 123 FLKKFPAGKVPAFESADGK 179
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 370 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDAHCQTRAWV 251
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 436 KXVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLS 287
K RVR PSST ++A+RS C + + + A+ SS LS
Sbjct: 425 KKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVTESSKLS 474
>04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260
Length = 456
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +3
Query: 141 AGKVPAFESADGKVLLTESNAIAYYVANESLR--GGD-LATQARVWQWA-SWSDSEL 299
AG+ P+ + V LT SNA+ Y A + GD LA+ ++++ + SW + EL
Sbjct: 173 AGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQEL 229
>04_04_0179 - 23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 301 CLLPVLGSSLTLVSCNSTNRMLNVQSLTYW 390
C LP +GS L + S ML++Q YW
Sbjct: 1228 CTLPCVGSVLRVFSNRFFKEMLHLQKGIYW 1257
>01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294
Length = 199
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 36 KALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKV--LLTESN 200
+ L+ + G + ++ + KS L + P G+VPAF+ D + LL ESN
Sbjct: 17 RVLVCLEEVGAEYELVGIHIPAGEQKSPAHLARNPFGQVPAFQDGDLILFDLLKESN 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,549,316
Number of Sequences: 37544
Number of extensions: 300220
Number of successful extensions: 819
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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