Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_L02
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80069-1|CAA56375.1| 475|Drosophila melanogaster 51KDa protein ... 284 8e-77
AY061102-1|AAL28650.1| 475|Drosophila melanogaster LD09025p pro... 284 8e-77
AJ290956-1|CAB93767.1| 475|Drosophila melanogaster eukaryotic t... 284 8e-77
AE014297-1976|AAF55153.1| 475|Drosophila melanogaster CG6476-PB... 284 8e-77
BT012446-1|AAS93717.1| 467|Drosophila melanogaster RE71279p pro... 270 1e-72
AE014297-1977|AAN13641.1| 467|Drosophila melanogaster CG6476-PC... 270 1e-72
X80070-1|CAA56376.1| 635|Drosophila melanogaster Su(var)3-9 pro... 126 3e-29
AJ290956-2|CAB93768.2| 635|Drosophila melanogaster histone-lysi... 126 3e-29
AE014297-1978|AAF55154.1| 635|Drosophila melanogaster CG6476-PA... 126 3e-29
AY071627-1|AAL49249.1| 511|Drosophila melanogaster RE67487p pro... 40 0.003
AE013599-3196|AAF46721.1| 511|Drosophila melanogaster CG9841-PA... 40 0.003
BT010319-1|AAQ23637.1| 456|Drosophila melanogaster AT01345p pro... 37 0.027
AY058330-1|AAL13559.1| 456|Drosophila melanogaster GH10272p pro... 37 0.027
AE013599-436|AAF59240.1| 456|Drosophila melanogaster CG12736-PA... 37 0.027
BT003749-1|AAO41413.1| 489|Drosophila melanogaster RH68252p pro... 35 0.11
AY058493-1|AAL13722.1| 300|Drosophila melanogaster GM14682p pro... 35 0.11
AE013599-1732|AAF58366.1| 489|Drosophila melanogaster CG6050-PA... 35 0.11
U88868-1|AAC24943.1| 619|Drosophila melanogaster elongation fac... 34 0.15
AY070979-1|AAL48601.1| 619|Drosophila melanogaster RE07731p pro... 31 1.8
AE014134-2205|AAF53194.1| 619|Drosophila melanogaster CG6382-PA... 31 1.8
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 30 3.1
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 30 3.1
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 30 3.1
AY119138-1|AAM50998.1| 696|Drosophila melanogaster RE37995p pro... 29 4.1
AE014297-4239|AAF56796.2| 696|Drosophila melanogaster CG12413-P... 29 4.1
>X80069-1|CAA56375.1| 475|Drosophila melanogaster 51KDa protein
protein.
Length = 475
Score = 284 bits (696), Expect = 8e-77
Identities = 137/166 (82%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Frame = +3
Query: 156 MASNEGRT-TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAI 332
MA+ E + NL +QDLS LDV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAI
Sbjct: 1 MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAI 60
Query: 333 SGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACT 512
SGVQTVRFKNELERNITIKLGYANAKIY+CDNPKCPRP SF+S SSKDDS PC R C+
Sbjct: 61 SGVQTVRFKNELERNITIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCS 120
Query: 513 GRFQLVRHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNESCPQ 650
G F+LVRHVSFV CPGHDILMATMLNGAAVMDA LLLIAGNESCPQ
Sbjct: 121 GNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQ 166
>AY061102-1|AAL28650.1| 475|Drosophila melanogaster LD09025p
protein.
Length = 475
Score = 284 bits (696), Expect = 8e-77
Identities = 137/166 (82%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Frame = +3
Query: 156 MASNEGRT-TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAI 332
MA+ E + NL +QDLS LDV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAI
Sbjct: 1 MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAI 60
Query: 333 SGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACT 512
SGVQTVRFKNELERNITIKLGYANAKIY+CDNPKCPRP SF+S SSKDDS PC R C+
Sbjct: 61 SGVQTVRFKNELERNITIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCS 120
Query: 513 GRFQLVRHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNESCPQ 650
G F+LVRHVSFV CPGHDILMATMLNGAAVMDA LLLIAGNESCPQ
Sbjct: 121 GNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQ 166
>AJ290956-1|CAB93767.1| 475|Drosophila melanogaster eukaryotic
translation initiationfactor 2 gamma subunit protein.
Length = 475
Score = 284 bits (696), Expect = 8e-77
Identities = 137/166 (82%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Frame = +3
Query: 156 MASNEGRT-TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAI 332
MA+ E + NL +QDLS LDV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAI
Sbjct: 1 MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAI 60
Query: 333 SGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACT 512
SGVQTVRFKNELERNITIKLGYANAKIY+CDNPKCPRP SF+S SSKDDS PC R C+
Sbjct: 61 SGVQTVRFKNELERNITIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCS 120
Query: 513 GRFQLVRHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNESCPQ 650
G F+LVRHVSFV CPGHDILMATMLNGAAVMDA LLLIAGNESCPQ
Sbjct: 121 GNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQ 166
>AE014297-1976|AAF55153.1| 475|Drosophila melanogaster CG6476-PB,
isoform B protein.
Length = 475
Score = 284 bits (696), Expect = 8e-77
Identities = 137/166 (82%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
Frame = +3
Query: 156 MASNEGRT-TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAI 332
MA+ E + NL +QDLS LDV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAI
Sbjct: 1 MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAI 60
Query: 333 SGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACT 512
SGVQTVRFKNELERNITIKLGYANAKIY+CDNPKCPRP SF+S SSKDDS PC R C+
Sbjct: 61 SGVQTVRFKNELERNITIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCS 120
Query: 513 GRFQLVRHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNESCPQ 650
G F+LVRHVSFV CPGHDILMATMLNGAAVMDA LLLIAGNESCPQ
Sbjct: 121 GNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQ 166
>BT012446-1|AAS93717.1| 467|Drosophila melanogaster RE71279p
protein.
Length = 467
Score = 270 bits (661), Expect = 1e-72
Identities = 127/144 (88%), Positives = 133/144 (92%)
Frame = +3
Query: 219 DVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGY 398
DV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGY
Sbjct: 15 DVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGY 74
Query: 399 ANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACTGRFQLVRHVSFVXCPGHDILMA 578
ANAKIY+CDNPKCPRP SF+S SSKDDS PC R C+G F+LVRHVSFV CPGHDILMA
Sbjct: 75 ANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMA 134
Query: 579 TMLNGAAVMDAXLLLIAGNESCPQ 650
TMLNGAAVMDA LLLIAGNESCPQ
Sbjct: 135 TMLNGAAVMDAALLLIAGNESCPQ 158
>AE014297-1977|AAN13641.1| 467|Drosophila melanogaster CG6476-PC,
isoform C protein.
Length = 467
Score = 270 bits (661), Expect = 1e-72
Identities = 127/144 (88%), Positives = 133/144 (92%)
Frame = +3
Query: 219 DVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGY 398
DV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGY
Sbjct: 15 DVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGY 74
Query: 399 ANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACTGRFQLVRHVSFVXCPGHDILMA 578
ANAKIY+CDNPKCPRP SF+S SSKDDS PC R C+G F+LVRHVSFV CPGHDILMA
Sbjct: 75 ANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMA 134
Query: 579 TMLNGAAVMDAXLLLIAGNESCPQ 650
TMLNGAAVMDA LLLIAGNESCPQ
Sbjct: 135 TMLNGAAVMDAALLLIAGNESCPQ 158
>X80070-1|CAA56376.1| 635|Drosophila melanogaster Su(var)3-9
protein.
Length = 635
Score = 126 bits (303), Expect = 3e-29
Identities = 65/80 (81%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +3
Query: 156 MASNEGRT-TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAI 332
MA+ E + NL +QDLS LDV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAI
Sbjct: 1 MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAI 60
Query: 333 SGVQTVRFKNELERNITIKL 392
SGVQTVRFKNELERNITIKL
Sbjct: 61 SGVQTVRFKNELERNITIKL 80
>AJ290956-2|CAB93768.2| 635|Drosophila melanogaster histone-lysine
N-methyltransferase,H3 lysine-9 specific protein.
Length = 635
Score = 126 bits (303), Expect = 3e-29
Identities = 65/80 (81%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +3
Query: 156 MASNEGRT-TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAI 332
MA+ E + NL +QDLS LDV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAI
Sbjct: 1 MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAI 60
Query: 333 SGVQTVRFKNELERNITIKL 392
SGVQTVRFKNELERNITIKL
Sbjct: 61 SGVQTVRFKNELERNITIKL 80
>AE014297-1978|AAF55154.1| 635|Drosophila melanogaster CG6476-PA,
isoform A protein.
Length = 635
Score = 126 bits (303), Expect = 3e-29
Identities = 65/80 (81%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +3
Query: 156 MASNEGRT-TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAI 332
MA+ E + NL +QDLS LDV+KL+ LSPEVISRQATINIGTIGHVAHGKSTVVKAI
Sbjct: 1 MATAEAQIGVNRNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAI 60
Query: 333 SGVQTVRFKNELERNITIKL 392
SGVQTVRFKNELERNITIKL
Sbjct: 61 SGVQTVRFKNELERNITIKL 80
>AY071627-1|AAL49249.1| 511|Drosophila melanogaster RE67487p
protein.
Length = 511
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = +3
Query: 276 NIGTIGHVAHGKSTVVKAISGV-QTVRF-KN--ELERNITIKLGYA 401
NIG +GHV GK+T+ KA+S + T F KN +ER IT+ LG++
Sbjct: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFS 51
Score = 35.1 bits (77), Expect = 0.083
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 540 SFVXCPGHDILMATMLNGAAVMDAXLLLI 626
+FV CPGH L+ T++ GA ++D LL++
Sbjct: 70 TFVDCPGHASLIRTIIGGAQIIDLMLLVV 98
>AE013599-3196|AAF46721.1| 511|Drosophila melanogaster CG9841-PA
protein.
Length = 511
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = +3
Query: 276 NIGTIGHVAHGKSTVVKAISGV-QTVRF-KN--ELERNITIKLGYA 401
NIG +GHV GK+T+ KA+S + T F KN +ER IT+ LG++
Sbjct: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFS 51
Score = 35.1 bits (77), Expect = 0.083
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 540 SFVXCPGHDILMATMLNGAAVMDAXLLLI 626
+FV CPGH L+ T++ GA ++D LL++
Sbjct: 70 TFVDCPGHASLIRTIIGGAQIIDLMLLVV 98
>BT010319-1|AAQ23637.1| 456|Drosophila melanogaster AT01345p
protein.
Length = 456
Score = 36.7 bits (81), Expect = 0.027
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 276 NIGTIGHVAHGKSTVVKAISGVQT 347
N+GTIGHV HGK+T+ AI+ +Q+
Sbjct: 59 NVGTIGHVDHGKTTLTAAITRIQS 82
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 531 RHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNE 638
R + CPGH + M++GA+ MD +L++A +
Sbjct: 120 RTYAHTDCPGHADYIKNMISGASQMDGAILVVAATD 155
>AY058330-1|AAL13559.1| 456|Drosophila melanogaster GH10272p
protein.
Length = 456
Score = 36.7 bits (81), Expect = 0.027
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 276 NIGTIGHVAHGKSTVVKAISGVQT 347
N+GTIGHV HGK+T+ AI+ +Q+
Sbjct: 59 NVGTIGHVDHGKTTLTAAITRIQS 82
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 531 RHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNE 638
R + CPGH + M++GA+ MD +L++A +
Sbjct: 120 RTYAHTDCPGHADYIKNMISGASQMDGAILVVAATD 155
>AE013599-436|AAF59240.1| 456|Drosophila melanogaster CG12736-PA
protein.
Length = 456
Score = 36.7 bits (81), Expect = 0.027
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 276 NIGTIGHVAHGKSTVVKAISGVQT 347
N+GTIGHV HGK+T+ AI+ +Q+
Sbjct: 59 NVGTIGHVDHGKTTLTAAITRIQS 82
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 531 RHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNE 638
R + CPGH + M++GA+ MD +L++A +
Sbjct: 120 RTYAHTDCPGHADYIKNMISGASQMDGAILVVAATD 155
>BT003749-1|AAO41413.1| 489|Drosophila melanogaster RH68252p
protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 276 NIGTIGHVAHGKSTVVKAISGV 341
N+GTIGHV HGK+T+ AI+ V
Sbjct: 84 NVGTIGHVDHGKTTLTAAITKV 105
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 531 RHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNE-SCPQ 650
RH CPGH + M+ G A MD +L++A + + PQ
Sbjct: 145 RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMPQ 185
>AY058493-1|AAL13722.1| 300|Drosophila melanogaster GM14682p
protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 276 NIGTIGHVAHGKSTVVKAISGV 341
N+GTIGHV HGK+T+ AI+ V
Sbjct: 84 NVGTIGHVDHGKTTLTAAITKV 105
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 531 RHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNE-SCPQ 650
RH CPGH + M+ G A MD +L++A + + PQ
Sbjct: 145 RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMPQ 185
>AE013599-1732|AAF58366.1| 489|Drosophila melanogaster CG6050-PA
protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 276 NIGTIGHVAHGKSTVVKAISGV 341
N+GTIGHV HGK+T+ AI+ V
Sbjct: 84 NVGTIGHVDHGKTTLTAAITKV 105
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 531 RHVSFVXCPGHDILMATMLNGAAVMDAXLLLIAGNE-SCPQ 650
RH CPGH + M+ G A MD +L++A + + PQ
Sbjct: 145 RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMPQ 185
>U88868-1|AAC24943.1| 619|Drosophila melanogaster elongation factor
1 alpha-likefactor protein.
Length = 619
Score = 34.3 bits (75), Expect = 0.15
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = +3
Query: 258 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKC 437
S++ +N+ IGHV GKST+ I + + K LE+ Y+ + +
Sbjct: 191 SKREHVNVVFIGHVDAGKSTIGGQIMSLTGMVHKRTLEK-------------YEREAREK 237
Query: 438 PRPTSFISGG-SSKDDSFPCLRPACTGR--FQLVR-HVSFVXCPGHDILMATMLNGAAVM 605
R + ++S G + + + GR F+ R H + + PGH + M+ GAA
Sbjct: 238 SRESWYLSWGLDTNQEERDKGKTVGVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQA 297
Query: 606 DAXLLLIAGNE 638
D +L+I+ +
Sbjct: 298 DLAVLVISARK 308
>AY070979-1|AAL48601.1| 619|Drosophila melanogaster RE07731p
protein.
Length = 619
Score = 30.7 bits (66), Expect = 1.8
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = +3
Query: 258 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKC 437
S++ +N+ IGHV GKST+ I + + K LE+ Y+ + +
Sbjct: 191 SKREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK-------------YEREAREK 237
Query: 438 PRPTSFISGG-SSKDDSFPCLRPACTGR--FQLVR-HVSFVXCPGHDILMATMLNGAAVM 605
R + ++S + + + GR F+ R H + + PGH + M+ GAA
Sbjct: 238 SRESWYLSWALDTNQEERDKGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQA 297
Query: 606 DAXLLLIAGNE 638
D +L+I+ +
Sbjct: 298 DLAVLVISARK 308
>AE014134-2205|AAF53194.1| 619|Drosophila melanogaster CG6382-PA
protein.
Length = 619
Score = 30.7 bits (66), Expect = 1.8
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = +3
Query: 258 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKC 437
S++ +N+ IGHV GKST+ I + + K LE+ Y+ + +
Sbjct: 191 SKREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK-------------YEREAREK 237
Query: 438 PRPTSFISGG-SSKDDSFPCLRPACTGR--FQLVR-HVSFVXCPGHDILMATMLNGAAVM 605
R + ++S + + + GR F+ R H + + PGH + M+ GAA
Sbjct: 238 SRESWYLSWALDTNQEERDKGKTVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQA 297
Query: 606 DAXLLLIAGNE 638
D +L+I+ +
Sbjct: 298 DLAVLVISARK 308
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 29.9 bits (64), Expect = 3.1
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 129 KYNRSNTTIMASNEGRTTQSNLHQQDLSKLDVTKLSALSPEVISR--QATINIGT-IGHV 299
K N T++ R+T + + +L L E+ +R QA N G +G +
Sbjct: 1023 KQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMVGAL 1082
Query: 300 AHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKD 479
A + T F +N+T+ + I PK P T F++GG+++D
Sbjct: 1083 AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD 1142
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p
protein.
Length = 1429
Score = 29.9 bits (64), Expect = 3.1
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 129 KYNRSNTTIMASNEGRTTQSNLHQQDLSKLDVTKLSALSPEVISR--QATINIGT-IGHV 299
K N T++ R+T + + +L L E+ +R QA N G +G +
Sbjct: 565 KQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMVGAL 624
Query: 300 AHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKD 479
A + T F +N+T+ + I PK P T F++GG+++D
Sbjct: 625 AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD 684
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 29.9 bits (64), Expect = 3.1
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 129 KYNRSNTTIMASNEGRTTQSNLHQQDLSKLDVTKLSALSPEVISR--QATINIGT-IGHV 299
K N T++ R+T + + +L L E+ +R QA N G +G +
Sbjct: 1023 KQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMVGAL 1082
Query: 300 AHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKD 479
A + T F +N+T+ + I PK P T F++GG+++D
Sbjct: 1083 AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD 1142
>AY119138-1|AAM50998.1| 696|Drosophila melanogaster RE37995p
protein.
Length = 696
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 180 TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISG 338
T + + + DV +PE++ + + + +GHV HGK+T++ ++ G
Sbjct: 133 TPEETNADEQKERDVAPRPPAAPELLQPRPPV-VTVMGHVDHGKTTLLDSLRG 184
>AE014297-4239|AAF56796.2| 696|Drosophila melanogaster CG12413-PA
protein.
Length = 696
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 180 TQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISG 338
T + + + DV +PE++ + + + +GHV HGK+T++ ++ G
Sbjct: 133 TPEETNADEQKERDVAPRPPAAPELLQPRPPV-VTVMGHVDHGKTTLLDSLRG 184
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,248,146
Number of Sequences: 53049
Number of extensions: 539403
Number of successful extensions: 1242
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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