Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_K13
         (339 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1721 - 39426957-39428005,39428812-39428839                       49   1e-06
05_04_0255 + 19462668-19462695,19463443-19464491                       47   4e-06
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422...    45   1e-05
08_01_0142 - 1121762-1122822,1123087-1123114                           44   4e-05
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347...    37   0.005
02_02_0580 + 11757667-11758258,11758419-11758572,11758682-117587...    27   3.8  
08_01_0355 - 3122374-3122520,3122912-3123047,3123124-3123221,312...    27   5.0  
04_01_0552 + 7125735-7126424,7126473-7126911,7127694-7128031           26   6.6  

>01_06_1721 - 39426957-39428005,39428812-39428839
          Length = 358

 Score = 48.8 bits (111), Expect = 1e-06
 Identities = 32/71 (45%), Positives = 40/71 (56%)
 Frame = +2

Query: 116 QEELKKIAQAIVAPAKGILAADESTGYNGKAFAGHXXXXXXXXXXXXXXQLLFSSDAVLS 295
           ++EL K A  I  P KGILAADESTG  GK FA                +LLF++   L 
Sbjct: 9   KDELIKNAAYIGTPGKGILAADESTGTIGKRFAS-INVENVEENRRSLRELLFTTPGAL- 66

Query: 296 ENISGVILFHE 328
           +++SGVILF E
Sbjct: 67  QHLSGVILFEE 77


>05_04_0255 + 19462668-19462695,19463443-19464491
          Length = 358

 Score = 46.8 bits (106), Expect = 4e-06
 Identities = 32/71 (45%), Positives = 38/71 (53%)
 Frame = +2

Query: 116 QEELKKIAQAIVAPAKGILAADESTGYNGKAFAGHXXXXXXXXXXXXXXQLLFSSDAVLS 295
           ++EL K A  I  P KGILAADESTG  GK FA                +LLF +   L 
Sbjct: 9   KDELIKNAAYIGTPGKGILAADESTGTIGKRFAS-INVENVEENRRSLRELLFCTPGAL- 66

Query: 296 ENISGVILFHE 328
           + +SGVILF E
Sbjct: 67  QYLSGVILFEE 77


>06_03_0718 +
           23840198-23840409,23841368-23841518,23842190-23842294,
           23843476-23843608,23844164-23844849,23844937-23845299
          Length = 549

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 30/69 (43%), Positives = 36/69 (52%)
 Frame = +2

Query: 122 ELKKIAQAIVAPAKGILAADESTGYNGKAFAGHXXXXXXXXXXXXXXQLLFSSDAVLSEN 301
           EL K A+ I  P KGILAADESTG  GK  A                +LLF++     + 
Sbjct: 202 ELIKTAKYIATPGKGILAADESTGTIGKRLAS-INVENVEPNRQALRELLFTTPGAF-QY 259

Query: 302 ISGVILFHE 328
           +SGVILF E
Sbjct: 260 LSGVILFEE 268


>08_01_0142 - 1121762-1122822,1123087-1123114
          Length = 362

 Score = 43.6 bits (98), Expect = 4e-05
 Identities = 30/71 (42%), Positives = 38/71 (53%)
 Frame = +2

Query: 116 QEELKKIAQAIVAPAKGILAADESTGYNGKAFAGHXXXXXXXXXXXXXXQLLFSSDAVLS 295
           ++EL + A  I  P KGILAADESTG  GK  A                +LLF++   L 
Sbjct: 9   KDELIRNAAYIGTPGKGILAADESTGTIGKRLAS-IGVENVEENRRALRELLFTAPGAL- 66

Query: 296 ENISGVILFHE 328
           + +SGVILF E
Sbjct: 67  DCLSGVILFEE 77


>11_01_0448 -
           3469398-3469676,3470015-3470284,3470386-3470476,
           3470581-3470690,3470867-3471136,3471768-3471914
          Length = 388

 Score = 36.7 bits (81), Expect = 0.005
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = +2

Query: 119 EELKKIAQAIVAPAKGILAADESTGYNGKAFAGHXXXXXXXXXXXXXXQLLFSSDAVLSE 298
           +EL K A+ I +P +GILA DES    GK  A                + L  +   L +
Sbjct: 43  DELVKTAKTIASPGRGILAMDESNATCGKRLAS--IGLENTEANRQAYRTLLVTAPGLGQ 100

Query: 299 NISGVILFHE 328
            ISG ILF E
Sbjct: 101 YISGAILFEE 110


>02_02_0580 +
           11757667-11758258,11758419-11758572,11758682-11758756,
           11758836-11758980,11759222-11759287,11759347-11759500,
           11761506-11761624
          Length = 434

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 214 RTSAXGEHRGEPSSLSPTPIQL*RCALREHLWCDPVP 324
           R SA G    + SS  P+P+QL  C+L+E L   P P
Sbjct: 44  RKSAAGAG-AQRSSPMPSPLQLSGCSLQELLLMSPPP 79


>08_01_0355 -
           3122374-3122520,3122912-3123047,3123124-3123221,
           3123724-3123801,3123876-3123945,3124452-3124516,
           3124606-3124686,3124822-3124926,3125002-3125085,
           3125175-3125250,3125358-3125436,3125526-3125646,
           3125768-3125827
          Length = 399

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 107 PELQEELKKIAQAIVAPAKGILAADESTGYNGKAFA 214
           PE+ E LKK   A +A AK + A     GY  K  A
Sbjct: 257 PEIDEALKKGEDAGLALAKKVYAYIHKNGYKTKLMA 292


>04_01_0552 + 7125735-7126424,7126473-7126911,7127694-7128031
          Length = 488

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 259 ITTTVLLCVLPXPMSCKRFPIVXGGFVSGEDTLCG 155
           +TT  +L  +P P++  R   +  GF SG    CG
Sbjct: 56  VTTRHVLSTVPPPLAPFRVAAISDGFDSGGMAACG 90


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,594,878
Number of Sequences: 37544
Number of extensions: 149552
Number of successful extensions: 285
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)