Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_K05
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-5|CAB03065.1|  151|Caenorhabditis elegans Hypothetical pr...   182   2e-46

>Z81077-5|CAB03065.1|  151|Caenorhabditis elegans Hypothetical
           protein F36A2.6 protein.
          Length = 151

 Score =  182 bits (443), Expect = 2e-46
 Identities = 85/126 (67%), Positives = 100/126 (79%)
 Frame = +1

Query: 100 VDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTH 279
           VDLDQLLDM  EQ  +L+          GLKRK +AL+ K+++AKK A   EKP  VKTH
Sbjct: 26  VDLDQLLDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKAAGVLEKPATVKTH 85

Query: 280 LRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 459
           LR+MII+PE+VG ++GIYNGK FNQ EIKPEMIG YLGEF+++YKPVKHGRPGIGATHSS
Sbjct: 86  LRDMIILPELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPGIGATHSS 145

Query: 460 RFIPLK 477
           RFIPLK
Sbjct: 146 RFIPLK 151



 Score = 29.5 bits (63), Expect = 1.7
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +3

Query: 27 TRNMAEVDETLKKKRIFRKFTYRG 98
          T++ A + E LKKKR FRKF YRG
Sbjct: 3  TQDDAHLAE-LKKKRTFRKFMYRG 25


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,362,952
Number of Sequences: 27780
Number of extensions: 211024
Number of successful extensions: 549
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)