Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_K02
(430 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces p... 29 0.23
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 28 0.53
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 28 0.71
SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone oxidoreductase/ARE-... 27 1.2
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 27 1.2
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 26 2.9
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 25 3.8
SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit Prp31|S... 25 3.8
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 25 3.8
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 25 3.8
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 5.0
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 25 5.0
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 5.0
SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 6.6
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 24 8.7
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 24 8.7
SPBC691.05c ||SPBP22H7.01c|membrane transporter |Schizosaccharom... 24 8.7
>SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 29.5 bits (63), Expect = 0.23
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 94 SNSNKQNGGSSTFSIRHHGSRLFEHGVPRHRTESRNNKLFSVTPKE 231
SN +Q GG ST+ I HG R G + + + NN + VTP E
Sbjct: 170 SNELEQFGGESTYFITKHGVRTLAMGFLFNFSSNANNTV--VTPVE 213
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 28.3 bits (60), Expect = 0.53
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +3
Query: 15 LVLKEADVYNTQKKKQ*LIRIE-----RDCCLKF-KQTKWRIVN 128
L LKE V + KK LI +E R+C L++ + TKW + N
Sbjct: 608 LELKEIPVASNSSKKTDLIELERLWLTRECILRYLRATKWHVSN 651
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 27.9 bits (59), Expect = 0.71
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 101 QTNKM-ADRQHFPSAITEAVSSNTACPDTGPKAETTN 208
+TN++ +HFP+ E ++ P TGP E+T+
Sbjct: 377 ETNQIPTTEEHFPATTEEVAPASEEKPATGPAEESTS 413
>SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone
oxidoreductase/ARE-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 329
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -2
Query: 246 DSIVIFFWSNR-KKFV-VSAFGPVSGHAVFE 160
D+I + F S R KFV S FG ++GHAVFE
Sbjct: 244 DAIPLKFLSARCLKFVRPSLFGYITGHAVFE 274
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 27.1 bits (57), Expect = 1.2
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 101 QTNKMADRQHFPSAITEAVSSNTACPDTGPKAETTNFFLLL-QKNITIESSKYVFSSIVE 277
Q+ ++ + +++T A N P + + +N + IT S++YV+S +E
Sbjct: 118 QSTNSSNSGSYRNSVTGATLPNAHAPHSQNRRRRSNHLNNPPEAPITEASNEYVYSFHLE 177
Query: 278 YILILTLMFAFSAILY 325
Y+ + + F+ SA+ Y
Sbjct: 178 YVPLESNTFSASALEY 193
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 2.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 89 LSQIQTNKMADRQHFPSAITEAVSSNTA 172
LS + T K +D +H + T VSSNTA
Sbjct: 168 LSNVFTEKSSDYRHGLGSPTSLVSSNTA 195
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 25.4 bits (53), Expect = 3.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 175 PRHRTESRNNKLFSVTPKEYND*VIKIRIQFDR*IYFNTNL 297
PR E+ + L + P + + ++ R+QFD+ +FN N+
Sbjct: 644 PREVLENIRDYLVTEKPLSFEECIMWARLQFDK--FFNNNI 682
>SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit
Prp31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 25.4 bits (53), Expect = 3.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 102 KQTKWRIVNIFHPPSRKPSLRTRRAPTPDRKQKQQ 206
K+ + +I + PPS+KP T P PD + K++
Sbjct: 346 KEVERKIEKLLEPPSQKP---TVALPVPDDRPKRR 377
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 3.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 352 CFL*KGTDRSRLXSYTSRVPDKGRR 426
C L + T +L S+ SR PDKG R
Sbjct: 365 CGLSEATYNVQLNSFFSRTPDKGTR 389
>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 862
Score = 25.4 bits (53), Expect = 3.8
Identities = 6/32 (18%), Positives = 21/32 (65%)
Frame = +2
Query: 239 IESSKYVFSSIVEYILILTLMFAFSAILYVIY 334
+ ++ Y F ++ Y+++++L + +I+Y ++
Sbjct: 177 LSTTLYYFYPVISYLVVVSLAYVSFSIIYALF 208
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 25.0 bits (52), Expect = 5.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 90 CLKFKQTKWRIVNIFHPPS 146
C Q +W I IFHPP+
Sbjct: 357 CFLSVQLRWFITYIFHPPA 375
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 25.0 bits (52), Expect = 5.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 79 NEIVVSNSNKQNGGSSTFSIRHHGSRLFEHGV 174
+ ++++ +K N S SIR ++ FEHG+
Sbjct: 176 SNVIMAADSKHNYSSGRPSIRLQSTQYFEHGL 207
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.0 bits (52), Expect = 5.0
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 68 NSN*TRLLSQIQTNKMADRQHFPS-AITEAVSSNTACPDTGPK 193
N+N + L S I +++ HFPS + ++ S TA P T K
Sbjct: 245 NANPSTLFSSIPSSRHTTSNHFPSNSAQSSLFSPTARPLTARK 287
>SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 24.6 bits (51), Expect = 6.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 127 LTIRHFVCLNLRQQSRSIRINYCFFFCVLYTSASF 23
L R F + LR+ S S + Y FF + YT++ F
Sbjct: 182 LLFRLFFGVFLRKNSISRLVGYIFFLRMRYTNSHF 216
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 218 LLQKNITIESSKYVFSSIVEYILILT 295
+L KN IES +V+ + EY L L+
Sbjct: 1039 ILNKNDCIESCIFVYRELAEYKLALS 1064
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 24.2 bits (50), Expect = 8.7
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3
Query: 81 RDCCLKFKQT 110
RDCC++F+QT
Sbjct: 1884 RDCCIRFEQT 1893
>SPBC691.05c ||SPBP22H7.01c|membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 668
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 173 CPDTGPKAETTNFFLLLQKNITIESSKYVFSSIV 274
CP P A+ + F L Q I+ SKY + ++
Sbjct: 128 CPGENPYADIISIFPLHQPKFDIKWSKYWYQLLL 161
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,810,780
Number of Sequences: 5004
Number of extensions: 36148
Number of successful extensions: 119
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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