Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_K02
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    24   0.63 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   2.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.7  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 138 PPSRKPSLRTRRAPTP 185
           PPSRK S R RR  TP
Sbjct: 400 PPSRKESGRRRRRRTP 415


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 94  SNSNKQNGGSSTFSIRHHGSR 156
           S  N   G S   S  HHGS+
Sbjct: 389 SGENNSRGHSGQSSSHHHGSK 409


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/40 (20%), Positives = 21/40 (52%)
 Frame = +2

Query: 20  VEGSRRI*YAKKKTIINSN*TRLLSQIQTNKMADRQHFPS 139
           + G RRI +A+++ I+++        +  + +  ++H  S
Sbjct: 304 INGRRRIIFARREVILSAGSVNTPQLLMLSGIGPKEHLRS 343


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +2

Query: 191 KAETTNFFLLLQKNITIESSKYVFSSIVEYILILTLMFAFS 313
           K +  +FF + +K  +++ S Y   + +   ++   +FAFS
Sbjct: 453 KKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLNDNVFAFS 493


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +2

Query: 191 KAETTNFFLLLQKNITIESSKYVFSSIVEYILILTLMFAFS 313
           K +  +FF + +K  +++ S Y   + +   ++   +FAFS
Sbjct: 453 KKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLNDNVFAFS 493


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,975
Number of Sequences: 438
Number of extensions: 2705
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)