Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_K01
(326 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1253 - 35753546-35753686,35753759-35753885,35753970-357541... 153 3e-38
03_06_0466 - 34134138-34134278,34134355-34134481,34134558-341347... 149 7e-37
10_06_0053 - 10110617-10111271,10112023-10112417,10112565-101126... 137 2e-33
04_01_0440 + 5746474-5746662,5746895-5747251 28 1.5
12_02_0494 + 19689245-19689414,19689605-19689894,19690665-19690747 27 4.6
04_01_0430 + 5651326-5651820,5651886-5652124,5652265-5652507,565... 27 4.6
03_01_0298 + 2318836-2319051,2321238-2323106 27 4.6
02_01_0335 + 2386902-2386906,2386976-2387282,2387664-2387777,239... 27 4.6
02_01_0125 + 920128-920392,920491-921839,921921-922084,922340-92... 27 4.6
04_03_1015 - 21734381-21736534 26 6.1
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34... 26 8.0
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634... 26 8.0
03_03_0217 + 15500943-15502196 26 8.0
02_03_0165 + 15870306-15870583,15870688-15870838,15871914-158721... 26 8.0
>01_06_1253 -
35753546-35753686,35753759-35753885,35753970-35754125,
35754761-35754853,35757132-35757265,35757339-35757465,
35757550-35757705,35758321-35758325
Length = 312
Score = 153 bits (371), Expect = 3e-38
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = +1
Query: 28 CRAIQMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKV 207
C ++ MGK RG+ RK HRR QRWADK +KK+H+G +WK PF G+SHAKGIVLEK+
Sbjct: 166 CPSVNMGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKI 224
Query: 208 GVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCL 315
G+EAKQPNSAIRKC RVQL+KNGKK+ AFVP DGCL
Sbjct: 225 GIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCL 260
Score = 149 bits (360), Expect = 7e-37
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = +1
Query: 43 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 222
MGK RG+ RK HRR QRWADK +KK+H+G +WK PF G+SHAKGIVLEK+G+EAK
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 223 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCL 315
QPNSAIRKC RVQL+KNGKK+ AFVP DGCL
Sbjct: 60 QPNSAIRKCARVQLVKNGKKIAAFVPNDGCL 90
>03_06_0466 -
34134138-34134278,34134355-34134481,34134558-34134713,
34135831-34135835
Length = 142
Score = 149 bits (360), Expect = 7e-37
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = +1
Query: 43 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 222
MGK RG+ RK HRR QRWADK +KK+H+G +WK PF G+SHAKGIVLEK+G+EAK
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 223 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCL 315
QPNSAIRKC RVQL+KNGKK+ AFVP DGCL
Sbjct: 60 QPNSAIRKCARVQLVKNGKKIAAFVPNDGCL 90
>10_06_0053 -
10110617-10111271,10112023-10112417,10112565-10112650,
10112973-10113021,10114164-10114290,10114372-10114526,
10114730-10114948
Length = 561
Score = 137 bits (331), Expect = 2e-33
Identities = 61/89 (68%), Positives = 70/89 (78%)
Frame = +1
Query: 49 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQP 228
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 229 NSAIRKCVRVQLIKNGKKVTAFVPRDGCL 315
NSAI KC RVQL+KNGKK+ AFVP DGCL
Sbjct: 133 NSAICKCARVQLVKNGKKIAAFVPNDGCL 161
>04_01_0440 + 5746474-5746662,5746895-5747251
Length = 181
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 102 AMGGQRIQESPHGYEMEG*PFRWCI-SRKGHRPR 200
A+GG P GY+ +G PF C KG+ PR
Sbjct: 126 AIGGMPAIAVPAGYDNQGVPFAICFGGLKGYEPR 159
>12_02_0494 + 19689245-19689414,19689605-19689894,19690665-19690747
Length = 180
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 145 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 249
KW AN GG IVL + + ++ PNSA + C
Sbjct: 46 KWAAN-LGGTPPGSCIVLLHISLLSRVPNSAPKFC 79
>04_01_0430 +
5651326-5651820,5651886-5652124,5652265-5652507,
5653159-5653360,5653679-5654035
Length = 511
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 102 AMGGQRIQESPHGYEMEG*PFRWCI-SRKGHRPR 200
A+GG P GY+ G PF C KG+ PR
Sbjct: 456 AIGGMPAITVPAGYDGHGVPFGICFGGLKGYEPR 489
>03_01_0298 + 2318836-2319051,2321238-2323106
Length = 694
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3
Query: 252 DAFADGRVGLLSFYTNFLEDDALCVRCTTERVSL 151
DAFA GLLS ++D LC+ C E VSL
Sbjct: 422 DAFAQCMGGLLSVV---VKDMRLCIECIDEGVSL 452
>02_01_0335 +
2386902-2386906,2386976-2387282,2387664-2387777,
2390252-2390320,2390416-2390715,2390829-2390930,
2391085-2391279,2391377-2391664,2391942-2392128,
2393168-2393272,2393778-2393824,2393982-2394074
Length = 603
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 100 QRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGK 279
++W E K+ T++ F +HA G+++ G+E +++I K GK
Sbjct: 439 EKWRRAEVPKSDSVTQY----FKNITHANGVIIHPAGLECSL-HASIDALGSCYGDKQGK 493
Query: 280 KVTAFVPR 303
K A+V R
Sbjct: 494 KYRAWVDR 501
>02_01_0125 +
920128-920392,920491-921839,921921-922084,922340-922370,
922534-922565,922730-923060,923210-923713
Length = 891
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 149 HFVPMWAFLNSLSAHRCSRRWFTCLRAVRI 60
H V WAFL + C F C+ V++
Sbjct: 577 HIVNSWAFLQPFTLQMCQVLQFACVNEVQL 606
>04_03_1015 - 21734381-21736534
Length = 717
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 229 NSAIRKCVRVQLIKNGKKVTAFVPRDG 309
+SA+ C + L+ +GK++ A++ R+G
Sbjct: 492 SSALAACANIFLLNHGKQIHAYMIRNG 518
>11_01_0044 +
340486-340854,341855-341911,343100-343974,344065-344398,
345553-345645,345913-346062
Length = 625
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 154 ANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVR 255
A +GGA++ +++ GVE KQ S I + VR
Sbjct: 564 AGTYGGAAYRDLEIVKGTGVEGKQKGSYILQHVR 597
>05_07_0323 +
29260608-29260836,29262242-29262513,29263349-29263487,
29263581-29263714,29263847-29263970,29264364-29264773
Length = 435
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 158 TLSVVHLTQRAXXXXXXXXXXXXPTLPSANAS-VYSSLRTERK*PHSSP 301
TL +H QRA P PSAN S S +R+ P+ +P
Sbjct: 365 TLETLHTDQRANATTSYSYSQSQPPSPSANPSPSRSPMRSSASSPYGAP 413
>03_03_0217 + 15500943-15502196
Length = 417
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 119 SLSAHRCSRRWFTCLRAVRIPR 54
++SA R SRRW LRA+ PR
Sbjct: 301 TMSAARPSRRWSALLRALSGPR 322
>02_03_0165 +
15870306-15870583,15870688-15870838,15871914-15872174,
15872849-15872930,15873584-15873777,15874267-15874581
Length = 426
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 241 RKCVRVQLIKNGKKVTAFVPRDGCLXT 321
RK VRVQL+++G + RD C T
Sbjct: 241 RKFVRVQLLRSGWCIRKIPGRDACRIT 267
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,839,987
Number of Sequences: 37544
Number of extensions: 241618
Number of successful extensions: 600
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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