Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_K01
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical pr... 171 1e-43
Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical pr... 43 6e-05
U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical pr... 29 1.0
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 27 3.2
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 27 4.2
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical ... 27 4.2
Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 26 5.6
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 26 5.6
AF016668-7|AAB66091.3| 471|Caenorhabditis elegans Hypothetical ... 26 7.4
Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z83744-2|CAB06039.1| 430|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical
protein F28D1.7 protein.
Length = 143
Score = 171 bits (416), Expect = 1e-43
Identities = 75/91 (82%), Positives = 84/91 (92%)
Frame = +1
Query: 43 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 222
MGKP+G+ TARK HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVLEK+GVEAK
Sbjct: 1 MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60
Query: 223 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCL 315
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCL
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCL 91
>Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical
protein T03D8.2 protein.
Length = 157
Score = 42.7 bits (96), Expect = 6e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +1
Query: 169 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 309
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG 117
>U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical
protein D2024.4 protein.
Length = 294
Score = 28.7 bits (61), Expect = 1.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 114 VRPSLFTTVVHVLTRRSYSSG 52
VRP + TTV+HV+ R SG
Sbjct: 189 VRPGIMTTVIHVMDRNPMKSG 209
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 138 HVGFLEFFVRPSLFTTVVHVLTRRS--YSSGFTHLDSTTPIGYGWE 7
HV +E+ R VV V T+ + +++G+T L TT YGW+
Sbjct: 158 HVWQIEWPERQRGTHAVVGVATKNAPLHAAGYTALIGTTDESYGWD 203
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 19 ADWCRAIQMGKPRGIRTARKHVNHRREQ-RWADKEFKKAH-MGTKWKANPF 165
ADWCR QM KP + + K + + WA + K + + TK+ N +
Sbjct: 43 ADWCRFSQMLKPIFLEASEKFKDAAPGKIMWASVDADKNNDIATKYHVNKY 93
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 19 ADWCRAIQMGKPRGIRTARKHVNHRREQ-RWADKEFKKAH-MGTKWKANPF 165
ADWCR QM KP + + K + + WA + K + + TK+ N +
Sbjct: 43 ADWCRFSQMLKPIFLEASEKFKDAAPGKIMWASVDADKNNDIATKYHVNKY 93
>AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical
protein C49A9.6 protein.
Length = 360
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Frame = +1
Query: 49 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFG--------GASHAKGIVLEK 204
K + + KH H + + D FKK GT+W +G G + +G +
Sbjct: 238 KTESLFVSNKH--HLEQGHFFDGNFKKNADGTRWTCQNYGQPVEQLAEGGINQRGKIFFT 295
Query: 205 VGVEAKQPNSAIRK 246
V +E QP RK
Sbjct: 296 VKIENFQPARGNRK 309
>Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical
protein C27A7.9 protein.
Length = 95
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 262 AVHGRICGWQSWAA*LLHQLSRGRC 188
AVH + C W +WAA S G C
Sbjct: 16 AVHSQNCTWSNWAAWTTCSDSCGNC 40
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 25 WCRAIQMGKPRGIRTARKHVNHR 93
WC +IQ+ G + RKH+ HR
Sbjct: 464 WCPSIQLLTYYGSQDERKHLRHR 486
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 25 WCRAIQMGKPRGIRTARKHVNHR 93
WC +IQ+ G + RKH+ HR
Sbjct: 464 WCPSIQLLTYYGSQDERKHLRHR 486
>AF016668-7|AAB66091.3| 471|Caenorhabditis elegans Hypothetical
protein F36H9.1 protein.
Length = 471
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 308 PSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPF 183
PSRG + + + L S L L C STP +R PF
Sbjct: 144 PSRGCSDLEYAEDLNSPNMCRLLNGLLECQCSTPYCNRDQPF 185
>Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical
protein T03D8.4 protein.
Length = 440
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 50 NPEEYERRVST*TTVVNSDGRTKNSRKPTWVRNGRLTL 163
NPEE + + T+ + S+GR + +K +R+ R+ L
Sbjct: 108 NPEEELQLATAPTSKIRSEGRITSEQKMDSIRDFRMKL 145
>Z83744-2|CAB06039.1| 430|Caenorhabditis elegans Hypothetical
protein C06A12.5 protein.
Length = 430
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 309 TVTGDECGHFLSVLNELY 256
T TG+ CG ++ +LNE+Y
Sbjct: 407 TGTGELCGTYMRLLNEVY 424
>Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical
protein C47G2.5a protein.
Length = 776
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 174 ISRKGHRPRESWCRS*AAQLCHPQMRP 254
+++ GHRP +W A H M P
Sbjct: 672 VTQTGHRPENNWVDETAPDFSHLDMAP 698
>AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical
protein W02G9.3 protein.
Length = 345
Score = 25.4 bits (53), Expect = 9.7
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -3
Query: 195 DDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVHV----LTRRSYS 58
DDA+C T RVSL H + FFV+ S T +V V RR YS
Sbjct: 290 DDAVCALAPTARVSL---NHAD-VTFFVQVSRTTIMVGVCRQFYDRRKYS 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,593,827
Number of Sequences: 27780
Number of extensions: 182627
Number of successful extensions: 409
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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