Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_J24
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92849-14|CAE17857.1| 359|Caenorhabditis elegans Hypothetical p... 29 3.8
Z78414-4|CAE17982.1| 359|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 28 5.0
AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical ... 28 5.0
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 28 5.0
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 28 6.6
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 27 8.7
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 27 8.7
U41275-3|AAA82466.1| 612|Caenorhabditis elegans Hypothetical pr... 27 8.7
U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical pr... 27 8.7
U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical pr... 27 8.7
U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z92849-14|CAE17857.1| 359|Caenorhabditis elegans Hypothetical
protein H12D21.11 protein.
Length = 359
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = -1
Query: 241 NAKPICLFVSQSLLVIFYSYFSNIPK-FIYIKIAFKVILHVELSVLFPELSNI 86
+A + L++ +SL +I ++++ K FIYI I FK++L + + + +SN+
Sbjct: 148 HAISMILYLDKSLALIKCGIYNSVGKTFIYISIVFKIMLDHFIRIFY--ISNL 198
>Z78414-4|CAE17982.1| 359|Caenorhabditis elegans Hypothetical
protein H12D21.11 protein.
Length = 359
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = -1
Query: 241 NAKPICLFVSQSLLVIFYSYFSNIPK-FIYIKIAFKVILHVELSVLFPELSNI 86
+A + L++ +SL +I ++++ K FIYI I FK++L + + + +SN+
Sbjct: 148 HAISMILYLDKSLALIKCGIYNSVGKTFIYISIVFKIMLDHFIRIFY--ISNL 198
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = -1
Query: 313 VPHLKIMISIEQ*IQN*DNEESYRNAKPICLFVSQSLLVIFYSYFSNIPKFIYIKIAFKV 134
+PHL+++ + + EES + + + +S++ L + IP I +A+
Sbjct: 169 LPHLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTNIEQFLRGIPAIRQISVAYNS 228
Query: 133 ILHVELSVLFPELSNI 86
I ++LS+ P L +
Sbjct: 229 IAELDLSLATPFLQQL 244
>AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical
protein C18H7.6 protein.
Length = 590
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = -1
Query: 262 DNEESYRNAKPICLFVSQSLLVIFYSYFSNIPKFIYIKIA 143
D ESY ++ P L ++ SL+++ + Y+ IP+ +Y ++A
Sbjct: 185 DLNESYTHSIP--LIIASSLIMVSFFYY--IPRMVYFRLA 220
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = -1
Query: 313 VPHLKIMISIEQ*IQN*DNEESYRNAKPICLFVSQSLLVIFYSYFSNIPKFIYIKIAFKV 134
+PHL+++ + + EES + + + +S++ L + IP I +A+
Sbjct: 169 LPHLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTNIEQFLRGIPAIRQISVAYNS 228
Query: 133 ILHVELSVLFPELSNI 86
I ++LS+ P L +
Sbjct: 229 IAELDLSLATPFLQQL 244
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 617 IPSTSPVRXRTAHCSMXYAHHTXIFHHQASHYSVSGSAS*HNIPSMLDQHQPIPPL 450
IPS PV T + + + + HH S Y SG+ + H I ++ D + P P L
Sbjct: 426 IPSGGPVMVST-NANRQMNRNAVLNHHNNSKYPASGNQNHHPI-ALEDLNHPPPTL 479
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 404 PSVTRTLERAHAKKLTR-VVLADADP 478
P V RT+ERAH K L R VLA P
Sbjct: 352 PQVVRTMERAHTKMLDRWSVLAIEGP 377
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 404 PSVTRTLERAHAKKLTR-VVLADADP 478
P V RT+ERAH K L R VLA P
Sbjct: 352 PQVVRTMERAHTKMLDRWSVLAIEGP 377
>U41275-3|AAA82466.1| 612|Caenorhabditis elegans Hypothetical
protein T25D1.1 protein.
Length = 612
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 253 ESYRNAKPICLFVSQSLLVIFYSYFSNIPKFIYIKIAFKVILHV-ELSVLFPELSNIFVL 77
E Y N+K CLF Q + F +++ IK A +V+ H+ E++ LF ++
Sbjct: 30 EMYTNSKASCLFEQQMAAGAAWFLFEANVEYLSIK-AHEVLFHLPEINELFGNTGSLSTF 88
Query: 76 S 74
S
Sbjct: 89 S 89
>U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical
protein F47B7.2a protein.
Length = 623
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 386 QWLPHTPSVTRTLERAHAKKLTRVVLADADPALKGYYVNLLTLTQS 523
+W+ + + L K++T + A + P L+GY L TL +
Sbjct: 382 EWITKVDEIQQALGNPLPKEITWMACAGSKPNLRGYTCGLWTLAHT 427
>U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical
protein F47B7.2c protein.
Length = 624
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 386 QWLPHTPSVTRTLERAHAKKLTRVVLADADPALKGYYVNLLTLTQS 523
+W+ + + L K++T + A + P L+GY L TL +
Sbjct: 382 EWITKVDEIQQALGNPLPKEITWMACAGSKPNLRGYTCGLWTLAHT 427
>U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical
protein F47B7.2b protein.
Length = 678
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 386 QWLPHTPSVTRTLERAHAKKLTRVVLADADPALKGYYVNLLTLTQS 523
+W+ + + L K++T + A + P L+GY L TL +
Sbjct: 382 EWITKVDEIQQALGNPLPKEITWMACAGSKPNLRGYTCGLWTLAHT 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,518,570
Number of Sequences: 27780
Number of extensions: 290103
Number of successful extensions: 708
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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