Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_J23
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical pr... 180 6e-46
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 6.5
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 28 6.5
Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical
protein C14A4.1 protein.
Length = 298
Score = 180 bits (439), Expect = 6e-46
Identities = 86/162 (53%), Positives = 112/162 (69%)
Frame = +1
Query: 151 SEXAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKHELAYCL 330
S+ + + G LND +P+K RFRALF LRNIG + ++ I +C DES LLKHELAYCL
Sbjct: 8 SDAEIDSFGEALNDTKKPLKARFRALFILRNIGCDRSVDWIGKCLNDESALLKHELAYCL 67
Query: 331 GQMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVAETC 510
GQMQ++ AIP L SVLED +P+VRHEAGEALGAI DP+++++L KY D EV+ETC
Sbjct: 68 GQMQNKHAIPTLVSVLEDEKQEPMVRHEAGEALGAIADPSVKDVLRKYAQDPCPEVSETC 127
Query: 511 QIALQRLNWVANDSKENDNLSKSLYTSVDPAPPSIENNLXAL 636
QIAL R+ WV K+ + S Y SVDP P + +++ L
Sbjct: 128 QIALGRVEWVEKSGKD----TNSPYDSVDPTPSASTSDVEEL 165
Score = 90.6 bits (215), Expect = 8e-19
Identities = 48/136 (35%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Frame = +1
Query: 145 NVSEXAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISE-CFKDESVLLKHELA 321
+ S V+ + L D S P+ +R+RA+F+LRNI + +I+ +++ + ++S L +HE+A
Sbjct: 156 SASTSDVEELAATLIDASLPLFDRYRAMFSLRNIKTDKSIKALAQGLYCEDSALFRHEVA 215
Query: 322 YCLGQMQDRRAIPILRSVLEDPNHDPIVRHEAGEALGAIGDPNLRELLEKYQHDSAIEVA 501
Y LGQ+Q A L+ L + +VRHE EALGAI + E+L++Y +D V
Sbjct: 216 YVLGQLQSPVATQELKDRLLLSTENCMVRHECAEALGAIANEECTEILKQYVNDEERVVR 275
Query: 502 ETCQIALQRLNWVAND 549
E+C++AL + +D
Sbjct: 276 ESCEVALDMAEYENSD 291
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +1
Query: 133 NQMANVSEXAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKH 312
++ A V AV +G++L + SR + A N+ GE QC+ D SVL++
Sbjct: 817 DESAEVRAAAVFALGSLLRNSSRSNEH---ASAVEENLAGELCSQCVF----DSSVLVRE 869
Query: 313 ELAYCL 330
EL L
Sbjct: 870 ELIVAL 875
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +1
Query: 133 NQMANVSEXAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKH 312
++ A V AV +G++L + SR + A N+ GE QC+ D SVL++
Sbjct: 817 DESAEVRAAAVFALGSLLRNSSRSNEH---ASAVEENLAGELCSQCVF----DSSVLVRE 869
Query: 313 ELAYCL 330
EL L
Sbjct: 870 ELIVAL 875
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +1
Query: 133 NQMANVSEXAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKH 312
++ A V AV +G++L + SR + A N+ GE QC+ D SVL++
Sbjct: 817 DESAEVRAAAVFALGSLLRNSSRSNEH---ASAVEENLAGELCSQCVF----DSSVLVRE 869
Query: 313 ELAYCL 330
EL L
Sbjct: 870 ELIVAL 875
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +1
Query: 133 NQMANVSEXAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKH 312
++ A V AV +G++L + SR + A N+ GE QC+ D SVL++
Sbjct: 817 DESAEVRAAAVFALGSLLRNSSRSNEH---ASAVEENLAGELCSQCVF----DSSVLVRE 869
Query: 313 ELAYCL 330
EL L
Sbjct: 870 ELIVAL 875
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +1
Query: 133 NQMANVSEXAVKNIGNVLNDPSRPMKERFRALFTLRNIGGETAIQCISECFKDESVLLKH 312
++ A V AV +G++L + SR + A N+ GE QC+ D SVL++
Sbjct: 841 DESAEVRAAAVFALGSLLRNSSRSNEH---ASAVEENLAGELCSQCVF----DSSVLVRE 893
Query: 313 ELAYCL 330
EL L
Sbjct: 894 ELIVAL 899
>Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical
protein T22B3.1 protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 290 SLKHSLIHCMAVSPPMFLNVNRAR 219
++ H IHC +V PP F+N +R
Sbjct: 408 NITHPGIHCTSVPPPAFINNETSR 431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,005,189
Number of Sequences: 27780
Number of extensions: 243917
Number of successful extensions: 662
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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