SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_J19
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX470111-2|CAO03574.1|  226|Homo sapiens BRCA1/BRCA2-containing ...   139   7e-33
X64643-1|CAA45917.1|  291|Homo sapiens C6.1A protein.                 122   8e-28
S68015-1|AAB29005.2|  321|Homo sapiens c6.1A protein.                 122   8e-28
BX470111-6|CAO03576.1|  247|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BX470111-5|CAI41654.1|  291|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BX470111-4|CAO03575.1|  292|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BX470111-3|CAI41655.1|  316|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BX293995-4|CAO03602.1|  247|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BX293995-3|CAH70538.1|  291|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BX293995-2|CAO03601.1|  292|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BX293995-1|CAH70537.1|  316|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BC006540-1|AAH06540.1|  316|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
BC002999-1|AAH02999.1|  316|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
AY438030-1|AAR30498.1|  316|Homo sapiens BRCA1/BRCA2-containing ...   122   8e-28
S72931-1|AAB30469.2|  363|Homo sapiens T-cell receptor alpha cha...    96   8e-20
BX470111-1|CAO03573.1|   90|Homo sapiens BRCA1/BRCA2-containing ...    96   8e-20
S68020-1|AAB29008.1|   37|Homo sapiens c6.1A protein.                  48   4e-05
U86782-1|AAC51866.1|  310|Homo sapiens 26S proteasome-associated...    44   4e-04
U70734-1|AAD03468.1|  334|Homo sapiens 38 kDa Mov34 homolog prot...    44   4e-04
CR541678-1|CAG46479.1|  334|Homo sapiens COPS5 protein.                44   4e-04
BC066336-1|AAH66336.1|  310|Homo sapiens proteasome (prosome, ma...    44   4e-04
BC007272-1|AAH07272.1|  334|Homo sapiens COP9 constitutive photo...    44   4e-04
BC001859-1|AAH01859.1|  334|Homo sapiens COP9 constitutive photo...    44   4e-04
BC001187-1|AAH01187.1|  334|Homo sapiens COP9 constitutive photo...    44   4e-04
AC009299-2|AAX88940.1|  154|Homo sapiens unknown protein.              44   4e-04
AB209134-1|BAD92371.1|  276|Homo sapiens COP9 signalosome subuni...    44   4e-04
U65928-1|AAB16847.1|  334|Homo sapiens Jun activation domain bin...    44   5e-04
BC032652-1|AAH32652.1|  471|Homo sapiens MPN domain containing p...    39   0.013
AC007292-1|AAD24592.1|  498|Homo sapiens R31167_1, partial prote...    39   0.013
AK027887-1|BAB55432.1|  451|Homo sapiens protein ( Homo sapiens ...    36   0.17 
AC007292-2|AAD24593.1|  448|Homo sapiens R31167_2, partial prote...    36   0.17 
AL450024-1|CAH70737.1|  828|Homo sapiens myb-like, SWIRM and MPN...    35   0.29 
AL035411-1|CAI21908.1|  828|Homo sapiens myb-like, SWIRM and MPN...    35   0.29 
AB067502-1|BAB67808.1|  726|Homo sapiens KIAA1915 protein protein.     35   0.29 

>BX470111-2|CAO03574.1|  226|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 226

 Score =  139 bits (337), Expect = 7e-33
 Identities = 68/104 (65%), Positives = 78/104 (75%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDR 268
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGEV D   +V I S +ILRR DK+ DR
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGEV-DAVRIVHIHSVIILRRSDKRKDR 65

Query: 269 VEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSH 400
           VEIS EQL  A+  AE LA   G+P+RVVGWYHSHPHITVWPSH
Sbjct: 66  VEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSH 109



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 557
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S   +
Sbjct: 111 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 161


>X64643-1|CAA45917.1|  291|Homo sapiens C6.1A protein.
          Length = 291

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 64.5 bits (150), Expect = 3e-10
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQSRIEIEMEIV 578
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI   + +   RIEI + IV
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIV 194

Query: 579 TNTDSLLTNNFETLTQLPTILKEE 650
            +  ++     E+  +LP IL +E
Sbjct: 195 PHV-TIGKVCLESAVELPKILCQE 217


>S68015-1|AAB29005.2|  321|Homo sapiens c6.1A protein.
          Length = 321

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 12  QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 71

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 72  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 131

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 132 ITVWPSH 138



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 557
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S   +
Sbjct: 140 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 190


>BX470111-6|CAO03576.1|  247|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 247

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 28/68 (41%), Positives = 39/68 (57%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRIEIEMEIVTN 584
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S     ++     +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSDLTHLDSVTKIH 194

Query: 585 TDSLLTNN 608
             S+ T N
Sbjct: 195 NGSVFTKN 202


>BX470111-5|CAI41654.1|  291|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 291

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 64.5 bits (150), Expect = 3e-10
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQSRIEIEMEIV 578
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI   + +   RIEI + IV
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIV 194

Query: 579 TNTDSLLTNNFETLTQLPTILKEE 650
            +  ++     E+  +LP IL +E
Sbjct: 195 PHV-TIGKVCLESAVELPKILCQE 217


>BX470111-4|CAO03575.1|  292|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 292

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/128 (52%), Positives = 81/128 (63%), Gaps = 24/128 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+ +                   
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTSRSDSKFAYTGTEMRTVAEK 66

Query: 212 -----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHP 376
                +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHP
Sbjct: 67  VDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHP 126

Query: 377 HITVWPSH 400
           HITVWPSH
Sbjct: 127 HITVWPSH 134



 Score = 64.5 bits (150), Expect = 3e-10
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQSRIEIEMEIV 578
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI   + +   RIEI + IV
Sbjct: 136 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIV 195

Query: 579 TNTDSLLTNNFETLTQLPTILKEE 650
            +  ++     E+  +LP IL +E
Sbjct: 196 PHV-TIGKVCLESAVELPKILCQE 218


>BX470111-3|CAI41655.1|  316|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 316

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 557
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S   +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 185


>BX293995-4|CAO03602.1|  247|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 247

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 28/68 (41%), Positives = 39/68 (57%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRIEIEMEIVTN 584
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S     ++     +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSDLTHLDSVTKIH 194

Query: 585 TDSLLTNN 608
             S+ T N
Sbjct: 195 NGSVFTKN 202


>BX293995-3|CAH70538.1|  291|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 291

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 64.5 bits (150), Expect = 3e-10
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQSRIEIEMEIV 578
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI   + +   RIEI + IV
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIV 194

Query: 579 TNTDSLLTNNFETLTQLPTILKEE 650
            +  ++     E+  +LP IL +E
Sbjct: 195 PHV-TIGKVCLESAVELPKILCQE 217


>BX293995-2|CAO03601.1|  292|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 292

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/128 (52%), Positives = 81/128 (63%), Gaps = 24/128 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+ +                   
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTSRSDSKFAYTGTEMRTVAEK 66

Query: 212 -----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHP 376
                +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHP
Sbjct: 67  VDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHP 126

Query: 377 HITVWPSH 400
           HITVWPSH
Sbjct: 127 HITVWPSH 134



 Score = 64.5 bits (150), Expect = 3e-10
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQSRIEIEMEIV 578
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI   + +   RIEI + IV
Sbjct: 136 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIV 195

Query: 579 TNTDSLLTNNFETLTQLPTILKEE 650
            +  ++     E+  +LP IL +E
Sbjct: 196 PHV-TIGKVCLESAVELPKILCQE 218


>BX293995-1|CAH70537.1|  316|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 316

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 557
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S   +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 185


>BC006540-1|AAH06540.1|  316|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 316

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 557
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S   +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 185


>BC002999-1|AAH02999.1|  316|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 316

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 557
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S   +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 185


>AY438030-1|AAR30498.1|  316|Homo sapiens BRCA1/BRCA2-containing
           complex subunit 36 protein.
          Length = 316

 Score =  122 bits (295), Expect = 8e-28
 Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 23/127 (18%)
 Frame = +2

Query: 89  EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 211
           + +Q V L SD  LVC+ HALSTEKEE+MGL IGE++D+                     
Sbjct: 7   QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66

Query: 212 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 379
               +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWYHSHPH
Sbjct: 67  DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126

Query: 380 ITVWPSH 400
           ITVWPSH
Sbjct: 127 ITVWPSH 133



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 557
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S   +
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 185


>S72931-1|AAB30469.2|  363|Homo sapiens T-cell receptor alpha
           chain-c6.1A fusion protein protein.
          Length = 363

 Score = 96.3 bits (229), Expect = 8e-20
 Identities = 45/72 (62%), Positives = 52/72 (72%)
 Frame = +2

Query: 185 IGEVHDNGALVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWY 364
           + E  D   +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWY
Sbjct: 18  VAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWY 77

Query: 365 HSHPHITVWPSH 400
           HSHPHITVWPSH
Sbjct: 78  HSHPHITVWPSH 89



 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 405 DLATQSMYQRMDAXFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 557
           D+ TQ+MYQ MD  FVG+IF+ F+ D++TK   V  TCFQSI    S   +
Sbjct: 91  DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 141


>BX470111-1|CAO03573.1|   90|Homo sapiens BRCA1/BRCA2-containing
           complex, subunit 3 protein.
          Length = 90

 Score = 96.3 bits (229), Expect = 8e-20
 Identities = 45/72 (62%), Positives = 52/72 (72%)
 Frame = +2

Query: 185 IGEVHDNGALVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWY 364
           + E  D   +V I S +ILRR DK+ DRVEIS EQL  A+  AE LA   G+P+RVVGWY
Sbjct: 4   VAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWY 63

Query: 365 HSHPHITVWPSH 400
           HSHPHITVWPSH
Sbjct: 64  HSHPHITVWPSH 75


>S68020-1|AAB29008.1|   37|Homo sapiens c6.1A protein.
          Length = 37

 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +2

Query: 116 SDVALVCMQHALSTEKEEIMGLLIGEVHD 202
           SD  LVC+ HALSTEKEE+MGL IGE+ +
Sbjct: 2   SDAFLVCLNHALSTEKEEVMGLCIGEIQN 30


>U86782-1|AAC51866.1|  310|Homo sapiens 26S proteasome-associated
           pad1 homolog protein.
          Length = 310

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 31/100 (31%), Positives = 50/100 (50%)
 Frame = +2

Query: 98  QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 277
           ++V +SS   L  ++H  +    E+MGL++GE  D+  +  I   V           VE 
Sbjct: 29  EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVI--DVFAMPQSGTGVSVE- 85

Query: 278 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
           + + + QA +   ++  + G+P  VVGWYHSHP    W S
Sbjct: 86  AVDPVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLS 123


>U70734-1|AAD03468.1|  334|Homo sapiens 38 kDa Mov34 homolog
           protein.
          Length = 334

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = +2

Query: 107 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 286
           ++S+   L  + HA S    E+MGL++G+V  +G  + I+ S  L  ++    RV  ++ 
Sbjct: 56  KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111

Query: 287 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
              +      E A +VG+    +GWYHSHP    W S
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLS 148


>CR541678-1|CAG46479.1|  334|Homo sapiens COPS5 protein.
          Length = 334

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = +2

Query: 107 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 286
           ++S+   L  + HA S    E+MGL++G+V  +G  + I+ S  L  ++    RV  ++ 
Sbjct: 56  KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111

Query: 287 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
              +      E A +VG+    +GWYHSHP    W S
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLS 148


>BC066336-1|AAH66336.1|  310|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 14 protein.
          Length = 310

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 31/100 (31%), Positives = 50/100 (50%)
 Frame = +2

Query: 98  QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 277
           ++V +SS   L  ++H  +    E+MGL++GE  D+  +  I   V           VE 
Sbjct: 29  EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVI--DVFAMPQSGTGVSVE- 85

Query: 278 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
           + + + QA +   ++  + G+P  VVGWYHSHP    W S
Sbjct: 86  AVDPVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLS 123


>BC007272-1|AAH07272.1|  334|Homo sapiens COP9 constitutive
           photomorphogenic homolog subunit 5 (Arabidopsis)
           protein.
          Length = 334

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = +2

Query: 107 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 286
           ++S+   L  + HA S    E+MGL++G+V  +G  + I+ S  L  ++    RV  ++ 
Sbjct: 56  KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111

Query: 287 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
              +      E A +VG+    +GWYHSHP    W S
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLS 148


>BC001859-1|AAH01859.1|  334|Homo sapiens COP9 constitutive
           photomorphogenic homolog subunit 5 (Arabidopsis)
           protein.
          Length = 334

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = +2

Query: 107 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 286
           ++S+   L  + HA S    E+MGL++G+V  +G  + I+ S  L  ++    RV  ++ 
Sbjct: 56  KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111

Query: 287 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
              +      E A +VG+    +GWYHSHP    W S
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLS 148


>BC001187-1|AAH01187.1|  334|Homo sapiens COP9 constitutive
           photomorphogenic homolog subunit 5 (Arabidopsis)
           protein.
          Length = 334

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = +2

Query: 107 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 286
           ++S+   L  + HA S    E+MGL++G+V  +G  + I+ S  L  ++    RV  ++ 
Sbjct: 56  KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111

Query: 287 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
              +      E A +VG+    +GWYHSHP    W S
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLS 148


>AC009299-2|AAX88940.1|  154|Homo sapiens unknown protein.
          Length = 154

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 31/100 (31%), Positives = 50/100 (50%)
 Frame = +2

Query: 98  QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 277
           ++V +SS   L  ++H  +    E+MGL++GE  D+  +  I   V           VE 
Sbjct: 29  EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVI--DVFAMPQSGTGVSVE- 85

Query: 278 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
           + + + QA +   ++  + G+P  VVGWYHSHP    W S
Sbjct: 86  AVDPVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLS 123


>AB209134-1|BAD92371.1|  276|Homo sapiens COP9 signalosome subunit 5
           variant protein.
          Length = 276

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = +2

Query: 107 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 286
           ++S+   L  + HA S    E+MGL++G+V  +G  + I+ S  L  ++    RV  ++ 
Sbjct: 25  KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 80

Query: 287 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
              +      E A +VG+    +GWYHSHP    W S
Sbjct: 81  AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLS 117


>U65928-1|AAB16847.1|  334|Homo sapiens Jun activation domain
           binding protein protein.
          Length = 334

 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 30/97 (30%), Positives = 48/97 (49%)
 Frame = +2

Query: 107 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 286
           ++S+   L  + HA S    E+MGL++G+V  +G  + I+ S  L  ++    RV  ++ 
Sbjct: 56  KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111

Query: 287 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
              +      E A +VG     +GWYHSHP    W S
Sbjct: 112 AAYEYMAAYIENAKQVGHLENAIGWYHSHPGYGCWLS 148


>BC032652-1|AAH32652.1|  471|Homo sapiens MPN domain containing
           protein.
          Length = 471

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
 Frame = +2

Query: 104 VRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISE 283
           V +SS+V  +   H+  T + E++G L G    N  +++++ +   R      +     E
Sbjct: 272 VAVSSNVLFLLDFHSHLT-RSEVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAIE 330

Query: 284 EQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS----HXXFGYSINV--SKDGCX 445
           E++ Q+            + L +VGWYHSHPH    PS         Y + +  S +G  
Sbjct: 331 EEIYQSLFL---------RGLSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQ 381

Query: 446 FCWNYFCSISYRPINKGPFS 505
            C    CS  Y   N GP S
Sbjct: 382 PCLALLCS-PYYSGNPGPES 400


>AC007292-1|AAD24592.1|  498|Homo sapiens R31167_1, partial protein
           protein.
          Length = 498

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
 Frame = +2

Query: 104 VRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISE 283
           V +SS+V  +   H+  T + E++G L G    N  +++++ +   R      +     E
Sbjct: 269 VAVSSNVLFLLDFHSHLT-RSEVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAIE 327

Query: 284 EQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS----HXXFGYSINV--SKDGCX 445
           E++ Q+            + L +VGWYHSHPH    PS         Y + +  S +G  
Sbjct: 328 EEIYQSLFL---------RGLSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQ 378

Query: 446 FCWNYFCSISYRPINKGPFS 505
            C    CS  Y   N GP S
Sbjct: 379 PCLALLCS-PYYSGNPGPES 397


>AK027887-1|BAB55432.1|  451|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14981 fis, clone Y79AA1000202. ).
          Length = 451

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = +2

Query: 344 LRVVGWYHSHPHITVWPS----HXXFGYSINV--SKDGCXFCWNYFCSISYRPINKGPFS 505
           L +VGWYHSHPH    PS         Y + +  S +G   C    CS  Y   N GP S
Sbjct: 292 LSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCS-PYYSGNPGPES 350


>AC007292-2|AAD24593.1|  448|Homo sapiens R31167_2, partial protein
           protein.
          Length = 448

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = +2

Query: 344 LRVVGWYHSHPHITVWPS----HXXFGYSINV--SKDGCXFCWNYFCSISYRPINKGPFS 505
           L +VGWYHSHPH    PS         Y + +  S +G   C    CS  Y   N GP S
Sbjct: 289 LSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCS-PYYSGNPGPES 347


>AL450024-1|CAH70737.1|  828|Homo sapiens myb-like, SWIRM and MPN
           domains 1 protein.
          Length = 828

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 28/99 (28%), Positives = 44/99 (44%)
 Frame = +2

Query: 101 KVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEIS 280
           +V+++S+  L+   HA      E++GLL G   +   +V + ++     L          
Sbjct: 576 QVKVASEALLIMDLHA-HVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQ----C 630

Query: 281 EEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
           E   V  T  +E LA    +   V+GWYHSHP     PS
Sbjct: 631 EMDPVSQTQASETLAV---RGFSVIGWYHSHPAFDPNPS 666


>AL035411-1|CAI21908.1|  828|Homo sapiens myb-like, SWIRM and MPN
           domains 1 protein.
          Length = 828

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 28/99 (28%), Positives = 44/99 (44%)
 Frame = +2

Query: 101 KVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEIS 280
           +V+++S+  L+   HA      E++GLL G   +   +V + ++     L          
Sbjct: 576 QVKVASEALLIMDLHA-HVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQ----C 630

Query: 281 EEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
           E   V  T  +E LA    +   V+GWYHSHP     PS
Sbjct: 631 EMDPVSQTQASETLAV---RGFSVIGWYHSHPAFDPNPS 666


>AB067502-1|BAB67808.1|  726|Homo sapiens KIAA1915 protein protein.
          Length = 726

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 28/99 (28%), Positives = 44/99 (44%)
 Frame = +2

Query: 101 KVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEIS 280
           +V+++S+  L+   HA      E++GLL G   +   +V + ++     L          
Sbjct: 474 QVKVASEALLIMDLHA-HVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQ----C 528

Query: 281 EEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPS 397
           E   V  T  +E LA    +   V+GWYHSHP     PS
Sbjct: 529 EMDPVSQTQASETLAV---RGFSVIGWYHSHPAFDPNPS 564


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,141,478
Number of Sequences: 237096
Number of extensions: 1335756
Number of successful extensions: 2796
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2785
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -