Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_J19
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    26   0.36 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.1  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    24   1.1  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   1.9  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   1.9  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   1.9  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   1.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   1.9  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   2.6  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -3

Query: 294 TSCSSDISTRSGFLSKRRSITDDTIETSAPLS*TS 190
           +SC    +  +  LSKRRS+++ ++ T++  S T+
Sbjct: 154 SSCGPGAAAAAALLSKRRSVSECSLGTASSTSSTA 188


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 576 VTNTDSLLTNNFETLTQLP 632
           VT  D+ L N F+TLTQ P
Sbjct: 127 VTERDNHLVNAFKTLTQEP 145


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 28  ILKILKSVTFNPHNNYKYKF*NATK 102
           I+  L + T + +NNYKY + N  K
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNNNCK 105


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 28  ILKILKSVTFNPHNNYKYKF*N 93
           I+  L + T + +NNYKY + N
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNN 102


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 28  ILKILKSVTFNPHNNYKYKF*N 93
           I+  L + T + +NNYKY + N
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNN 102


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 28  ILKILKSVTFNPHNNYKYKF*N 93
           I+  L + T + +NNYKY + N
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNN 102


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 28  ILKILKSVTFNPHNNYKYKF*N 93
           I+  L + T + +NNYKY + N
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNN 102


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 28  ILKILKSVTFNPHNNYKYKF*N 93
           I+  L + T + +NNYKY + N
Sbjct: 314 IISSLSNKTIHNNNNYKYNYNN 335


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 28  ILKILKSVTFNPHNNYKYKF*N 93
           I+  L + T + +NNYKY + N
Sbjct: 81  IISSLSNRTIHNNNNYKYNYNN 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,375
Number of Sequences: 438
Number of extensions: 2727
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)