Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_J13
(377 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical pr... 29 0.83
Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 27 3.4
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 27 3.4
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 27 3.4
AF067940-6|AAC19205.1| 223|Caenorhabditis elegans Hypothetical ... 27 5.9
AF016685-7|AAG24151.1| 341|Caenorhabditis elegans Seven tm rece... 27 5.9
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 26 7.8
AL132877-14|CAD92388.1| 439|Caenorhabditis elegans Hypothetical... 26 7.8
AL132877-13|CAC70110.4| 478|Caenorhabditis elegans Hypothetical... 26 7.8
>U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical
protein D2096.3 protein.
Length = 936
Score = 29.5 bits (63), Expect = 0.83
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 69 CHFVPGRIQSHCVSRGSASXRPPSWSPLGRGCC 167
C+ PG Q C SRG PS SP+G C
Sbjct: 33 CYPEPGASQDACQSRGCIWTEAPSSSPVGTPWC 65
>Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical
protein K02B7.1 protein.
Length = 742
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 135 PSWSPLGRGCCQLQNGFVERYHVPIYLVLSNC 230
P +SP G G C QN ++ H+ +L C
Sbjct: 429 PHYSPKGNGICSRQNRWIFHQHLRFHLDFVRC 460
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +3
Query: 57 ELNQCHFVPGRIQSHCVSRGSASXRPPSWSPLGRGCCQLQNGFVERYHVPIYLVLSN 227
+L++C + QS C G S + LGR +L ++E++H + + N
Sbjct: 692 QLSECIKLVKEFQSKCDKEGWYSTQNQKVGGLGRSVNKLSMDYIEKFHAARKIRIGN 748
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 124 DADPRETQWDCIRPGTKWHWFSSGATPHKHVTTRNTMTDQI 2
D DP +W +K H TP+++ T+R T D++
Sbjct: 748 DVDPEYEEWAHRFVQSKMHVEEEQETPYEYYTSRRTSMDEL 788
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 124 DADPRETQWDCIRPGTKWHWFSSGATPHKHVTTRNTMTDQI 2
D DP +W +K H TP+++ T+R T D++
Sbjct: 748 DVDPEYEEWAHRFVQSKMHVEEEQETPYEYYTSRRTSMDEL 788
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 124 DADPRETQWDCIRPGTKWHWFSSGATPHKHVTTRNTMTDQI 2
D DP +W +K H TP+++ T+R T D++
Sbjct: 748 DVDPEYEEWAHRFVQSKMHVEEEQETPYEYYTSRRTSMDEL 788
>AF067940-6|AAC19205.1| 223|Caenorhabditis elegans Hypothetical
protein F36F12.6 protein.
Length = 223
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 175 CSWQQPRPSGDQ 140
C+WQ PRPS D+
Sbjct: 199 CTWQDPRPSSDK 210
>AF016685-7|AAG24151.1| 341|Caenorhabditis elegans Seven tm
receptor protein 86 protein.
Length = 341
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 171 LQNGFVERYHVPIYLVLSNCKFCFNLSII 257
L G+V RY PI+L+ C F F L ++
Sbjct: 75 LYEGYVSRYLAPIFLI-DFCAFYFTLILL 102
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 198 DTVLQTHFVAGSNHAPAATKMAAXRMQTHAKRNGTVSDLAQNGTGLVPELHH 43
D+ L + S H+P K A + Q A +NGT N +G++ L H
Sbjct: 238 DSPLHNYIYRTSRHSPLYRKKLAEQAQRMAVKNGTF----VNDSGVIELLSH 285
>AL132877-14|CAD92388.1| 439|Caenorhabditis elegans Hypothetical
protein Y105E8B.8b protein.
Length = 439
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 172 SWQQPRPSGDQDGGRXDADPRETQWDCIRPGTKWHW 65
+++ P PS Q G + R T+ R GTKW W
Sbjct: 216 NYKPPPPSLGQFGSQMGTWFRNTEMFAGRFGTKWSW 251
>AL132877-13|CAC70110.4| 478|Caenorhabditis elegans Hypothetical
protein Y105E8B.8a protein.
Length = 478
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 172 SWQQPRPSGDQDGGRXDADPRETQWDCIRPGTKWHW 65
+++ P PS Q G + R T+ R GTKW W
Sbjct: 255 NYKPPPPSLGQFGSQMGTWFRNTEMFAGRFGTKWSW 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,942,849
Number of Sequences: 27780
Number of extensions: 154186
Number of successful extensions: 393
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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