Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_J12
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25H1.04 |mug105||DUF1671 family protein|Schizosaccharomyces ... 39 5e-04
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 29 0.76
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.3
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 27 1.8
SPAC1006.01 |psp3||serine protease Psp3 |Schizosaccharomyces pom... 27 2.3
SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb... 27 3.1
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 26 5.4
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 26 5.4
SPAC19B12.08 |||peptidase family C54|Schizosaccharomyces pombe|c... 25 7.1
SPAC1687.19c |||queuine tRNA-ribosyltransferase|Schizosaccharomy... 25 7.1
>SPAC25H1.04 |mug105||DUF1671 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 244
Score = 39.1 bits (87), Expect = 5e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 79 LIKGNYEYYHYLCDGFDDRGWGCGYRTLQTICSWLK 186
L G+ +Y+ + G D RGWGCG+R +Q + SWL+
Sbjct: 22 LADGDIDYF-FTVTGID-RGWGCGWRNIQMLISWLQ 55
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 28.7 bits (61), Expect = 0.76
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = -2
Query: 247 SQPVSIESLVLKVQLHPYDLISARNISSEEFYNRNPSPYRQIHHTSNDNI 98
S P+S + + + + L SA + SS+ ++PSPY+ ++S+D +
Sbjct: 259 STPLSFHAPIPPLHVPAVPLTSASHSSSDGKSRKHPSPYKPYLNSSHDTL 308
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TSPPI + + + +ST+V S+P+ +++ ++ S T + PI +
Sbjct: 1651 NTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 1710
Query: 269 NVLDLSSKSTSID 231
N + ST ++
Sbjct: 1711 NSSTPITSSTVVN 1723
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST+V S+P+ +L+ ++ S T S PI +
Sbjct: 559 NTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSSTPITSSSVL 618
Query: 269 NVLDLSSKSTSID 231
N + ST+++
Sbjct: 619 NSSTPITSSTALN 631
Score = 26.2 bits (55), Expect = 4.1
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHG----TSNSL--SITKQTSKLPI 288
+TS PI + + + +ST+V S+P+ +L+ TS+S+ S T TS +
Sbjct: 1363 NTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVV 1422
Query: 287 HCLEPINVLDLSSKSTSID*ISRIEGTATSI 195
+ PI + + ST I S + T+T I
Sbjct: 1423 NTSTPITSSTVVNSSTPIT-SSTVVNTSTPI 1452
Score = 26.2 bits (55), Expect = 4.1
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHG----TSNSL--SITKQTSKLPI 288
+TS PI + + + +ST+V S+P+ +L+ TS+S+ S T TS +
Sbjct: 2203 NTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVV 2262
Query: 287 HCLEPINVLDLSSKSTSID*ISRIEGTATSI 195
+ PI + + ST I S + T+T I
Sbjct: 2263 NTSTPITSSTVVNSSTPIT-SSTVVNTSTPI 2292
Score = 25.8 bits (54), Expect = 5.4
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHG----TSNSL--SITKQTSKLPI 288
+TS PI + + + +ST+V S+P+ L+ TS+S+ S T TS +
Sbjct: 2335 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITSSSVLNSSTPITSSTVV 2394
Query: 287 HCLEPINVLDLSSKSTSID*ISRIEGTATSI 195
+ PI + + ST I S + T+TSI
Sbjct: 2395 NTSTPITSSSVLNSSTPIT-SSTVVNTSTSI 2424
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = -1
Query: 473 PMIPLDEQSTSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKL 294
P+ L ++S PI + + + +ST+V S+P+ +++ ++ S T +
Sbjct: 2567 PITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTST 2626
Query: 293 PIHCLEPINVLDLSSKSTSID 231
PI +N + ST+++
Sbjct: 2627 PITSSSVLNSSTPITSSTALN 2647
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST+V S+P+ +++ ++ S T S PI +
Sbjct: 2779 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 2838
Query: 269 NVLDLSSKSTSID 231
N + ST+++
Sbjct: 2839 NSSTPITSSTALN 2851
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST+V S+P+ +++ ++ S T + PI +
Sbjct: 3259 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVL 3318
Query: 269 NVLDLSSKSTSID 231
N + ST+++
Sbjct: 3319 NSSTAITSSTALN 3331
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
++S PI + + + +ST+V S+P+ +++ ++ S+T S PI +
Sbjct: 2527 NSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTALNSSTPITSSSVL 2586
Query: 269 NVLDLSSKSTSID 231
N + ST ++
Sbjct: 2587 NSSTPITSSTVVN 2599
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST+V S+P+ +L+ ++ S T + PI +
Sbjct: 1423 NTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVV 1482
Query: 269 NVLDLSSKSTSID 231
N + ST ++
Sbjct: 1483 NSSTPITSSTVVN 1495
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST+V S+P+ +++ ++ S T + PI +
Sbjct: 1807 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 1866
Query: 269 NVLDLSSKSTSID 231
N + ST+++
Sbjct: 1867 NSSTPITSSTALN 1879
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST+V S+P+ +++ ++ S T + PI +
Sbjct: 1999 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 2058
Query: 269 NVLDLSSKSTSID 231
N + ST+++
Sbjct: 2059 NSSTPITSSTALN 2071
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST+V S+P+ +++ ++ S T S PI +
Sbjct: 2479 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 2538
Query: 269 NVLDLSSKSTSID 231
N + ST ++
Sbjct: 2539 NSSTPITSSTVVN 2551
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST++ S+P+ +L+ ++ S T + PI +
Sbjct: 2803 NTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVL 2862
Query: 269 NVLDLSSKSTSID 231
N + ST+++
Sbjct: 2863 NSSTPITSSTALN 2875
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -1
Query: 449 STSPPIITGLLYSMKCLTKASTIVLRSSPLFI*IILHGTSNSLSITKQTSKLPIHCLEPI 270
+TS PI + + + +ST+V S+P+ +++ ++ S T + PI +
Sbjct: 2899 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 2958
Query: 269 NVLDLSSKSTSID 231
N + ST+++
Sbjct: 2959 NSSTPITSSTALN 2971
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +1
Query: 346 IIHINKGDDLKTIVDALVKHFIEYS 420
++ +G+DLK ++DAL+ +E+S
Sbjct: 566 MVENGQGEDLKRVIDALLNRAVEFS 590
>SPAC1006.01 |psp3||serine protease Psp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 451
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 556 VDNFYVVVFQHSVDRPPINWHH 491
V N Y+V+F+ SVD+ + HH
Sbjct: 76 VSNNYIVMFKPSVDKSKLEQHH 97
>SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +1
Query: 139 WGCGYRTLQTICSWLKLNHMDVAVPSIREIQSILVDLEDKSKTFIGSRQWIGSFEVCLVI 318
+G GY L++I + K + AVP++ I I + + + I QWI ++
Sbjct: 469 FGVGYTQLKSIFPFAKWLQ-EAAVPNMASINDIGISRVYRRRIAIFLSQWIEDSSSEQLL 527
Query: 319 DKLFDVPCKIIHI 357
+ ++ + C +++
Sbjct: 528 EVIYKLYCSFLNL 540
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 482 LETMVPVYWWSIHTMLENNHVKIIYKTMA 568
LET +H +L N+VK+IY+T A
Sbjct: 547 LETFFAYIVHLLHGVLNRNNVKLIYETAA 575
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = -1
Query: 419 LYSMKCLTKASTIVLRSSPLFI*IILHGTSN-SLSITK--QTSKLPIHCLEPINVLDLSS 249
L ++ L+ A+ + L S+ + + G +N +LS T ++LP+H L + LD+S
Sbjct: 240 LQFLQTLSLANNLNLYSADGYAVDVFQGINNLNLSSTSLADVAELPVHTLHKLTFLDISE 299
Query: 248 KS 243
+
Sbjct: 300 NN 301
>SPAC19B12.08 |||peptidase family C54|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 130 DRGWGCGYRTLQTICSWLKLNHMDVAVPSIREIQSILVDLEDKSKTFIGSRQWI 291
D GWGC R+ QT+ + N + + P ++++ IL D+ Q++
Sbjct: 69 DTGWGCMIRSTQTLLA----NCLRICYPE-KQLKEILALFADEPSAPFSIHQFV 117
>SPAC1687.19c |||queuine tRNA-ribosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +1
Query: 382 IVDALVKHFIEYSSPVMMGGDVDCSSKGIMGIHIGDHGASLLVVDPHYVGKQPRKNYLQD 561
+ D + H + SPV M S KG++ + G +++ + +++G +P + L
Sbjct: 23 VTDIQLPHGL-VESPVFMPVGTQASLKGVLPEQLDALGCKIMLNNTYHLGLKPGQEVLDT 81
Query: 562 HG 567
G
Sbjct: 82 VG 83
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,906,012
Number of Sequences: 5004
Number of extensions: 64240
Number of successful extensions: 256
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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