Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_J04
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 213 8e-56
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.4
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 213 bits (520), Expect = 8e-56
Identities = 102/164 (62%), Positives = 118/164 (71%)
Frame = +3
Query: 3 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 182
G VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 2 GLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVV 61
Query: 183 CQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXX 362
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 62 AQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKG 121
Query: 363 XXXXXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKG 494
+YNVE + F LD+GLARTTTG+++F MKG
Sbjct: 122 HEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKG 164
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 EGCCDGGLNVPHSIKRFLAM-MXNPKVNAEVHR 583
+G DGG+NVPHS RF + + NAE HR
Sbjct: 163 KGVADGGINVPHSESRFFGFDQESKEYNAEAHR 195
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 234 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 121
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 234 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 121
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 129 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 248
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 276 SDQPSHHNVATHVNKQRTQYGHLQSESRP 190
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 276 SDQPSHHNVATHVNKQRTQYGHLQSESRP 190
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 276 SDQPSHHNVATHVNKQRTQYGHLQSESRP 190
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/69 (20%), Positives = 31/69 (44%)
Frame = -1
Query: 276 SDQPSHHNVATHVNKQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYICSCPEQRGVY 97
+D P+ +V+ + T + + E PG W +++DI + + + V
Sbjct: 291 NDLPAEKLTKLNVSARSTTFVPITLEGNVPGRKLYWWWRLENNDINFSILRAAEGEEKVA 350
Query: 96 EHNNQFSLH 70
EH++ + +H
Sbjct: 351 EHDDDYMVH 359
>AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical
protein C29G2.5 protein.
Length = 391
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 120 KNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 212
K+K TP YRL++ L + D+T V S I G
Sbjct: 187 KSKSRTPTYRLMLILGSLDLTGLVISSLIPG 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,187,225
Number of Sequences: 27780
Number of extensions: 268939
Number of successful extensions: 710
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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