Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_J01
         (531 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...   164   3e-41
AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...   125   2e-29
U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like pr...    31   0.68 
Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF045641-4|AAO91715.1|  332|Caenorhabditis elegans Hypothetical ...    29   2.1  
AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical ...    29   2.1  
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    29   2.1  
AF039710-3|AAD32272.1|  347|Caenorhabditis elegans Serpentine re...    29   2.1  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AF039710-4|AAD32273.1|  347|Caenorhabditis elegans Serpentine re...    27   6.3  
Z81062-10|CAB02940.1|   79|Caenorhabditis elegans Hypothetical p...    27   8.4  
U39648-2|AAM15606.1|  166|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF303270-1|AAG50228.1|   79|Caenorhabditis elegans 2M776 protein.      27   8.4  

>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score =  164 bits (399), Expect = 3e-41
 Identities = 66/113 (58%), Positives = 94/113 (83%)
 Frame = +2

Query: 152 VNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIK 331
           VNVY+T  +++NLSRH+ML WVNDCLQ++F KIE+L TGA YC F D LFP S+ +K++K
Sbjct: 6   VNVYTTASSADNLSRHEMLMWVNDCLQAHFTKIEQLHTGAGYCLFTDFLFPDSIQLKKVK 65

Query: 332 FKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWFKKFF 490
           + + LE +++ N+K++Q  +K +GV+K++P+DKL+KG+FQDNFEFLQWFKK F
Sbjct: 66  WNSRLELDWLSNWKLVQTTWKNLGVEKVIPVDKLIKGKFQDNFEFLQWFKKLF 118


>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score =  125 bits (301), Expect = 2e-29
 Identities = 53/115 (46%), Positives = 83/115 (72%)
 Frame = +2

Query: 146 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 325
           M VNV+ + VT++ LSR + +AWVN+ L+S+F K+EE+ +GAAYCQ   +LF  ++ +K+
Sbjct: 1   MVVNVFISAVTTDTLSRKEAVAWVNNLLKSHFTKVEEMASGAAYCQLTHLLF-NAINLKK 59

Query: 326 IKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWFKKFF 490
           +KF    E + + N+K+L   +K +G+DK V ++K+ K +FQDN EFLQWF KF+
Sbjct: 60  VKFNPRSEPDVLNNWKVLTTTWKDLGIDKPVDVEKMKKAKFQDNMEFLQWFYKFY 114


>U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like
           protein family protein20 protein.
          Length = 217

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 520 VICRTSIVGVKEFLEPLQKLKIILETTLHQFVN 422
           +IC      V  FL P++K+++I +T L  FVN
Sbjct: 136 IICTNCQSAVNAFLAPIKKVELITKTELTDFVN 168


>Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical
           protein W07G1.2 protein.
          Length = 363

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -3

Query: 502 IVGVKEFLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDS 323
           ++G   +   L    ++ +  L  F +  YL+   +F   + YF +   +   ICLK   
Sbjct: 4   LIGNSSYFRVLTPTTVLHDHRLRGFPDNIYLIVYGIFHLLIMYFVLKCAY---ICLKIRV 60

Query: 322 FHW 314
           FHW
Sbjct: 61  FHW 63


>Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical
           protein T09E11.10 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = +2

Query: 287 MDMLFPGSVPMKR-IKFKTNL---EHEYIQNFKILQAGFKK 397
           M M+F G  P K  I F +++   +HEY++ ++I  A FK+
Sbjct: 288 MTMMFMGYEPTKEPILFSSHIPLKDHEYLEQYRIQMADFKE 328


>AF045641-4|AAO91715.1|  332|Caenorhabditis elegans Hypothetical
           protein F53H1.4b protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +2

Query: 146 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 325
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 17  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 75

Query: 326 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 430
           ++  T + H  ++  K L     KK+ ++    +D+
Sbjct: 76  MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 111


>AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical
           protein F53H1.4c protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +2

Query: 146 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 325
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 53  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 111

Query: 326 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 430
           ++  T + H  ++  K L     KK+ ++    +D+
Sbjct: 112 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 147


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
           protein F53H1.4a protein.
          Length = 1370

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +2

Query: 146 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 325
           +A+ VYS  V + NLS  D+L  + D +   F   E+L +       +     G + +  
Sbjct: 53  LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 111

Query: 326 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 430
           ++  T + H  ++  K L     KK+ ++    +D+
Sbjct: 112 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 147


>AF039710-3|AAD32272.1|  347|Caenorhabditis elegans Serpentine
           receptor, class h protein100 protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = +2

Query: 155 NVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKF 334
           N YSTN +  NLS   + +W      ++F +I  L        F  +L    V MK +K+
Sbjct: 7   NYYSTNYSKCNLSESFLASWKGVAYPTDFIQIFSL--PLQILAFYIILTKTPVQMKSMKW 64

Query: 335 KTNLEHEYIQNFKILQAGF 391
                H +   F ++   F
Sbjct: 65  PLFYNHLFCSIFDVILCTF 83


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 484 FLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLY 359
           F+E L+ LK +L++ LH   N Y+L H  +   S   F +LY
Sbjct: 21  FVE-LRSLKNLLKSILHNIENDYFLAHQKVRLYSSHNFVMLY 61


>AF039710-4|AAD32273.1|  347|Caenorhabditis elegans Serpentine
           receptor, class h protein99 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 20/79 (25%), Positives = 32/79 (40%)
 Frame = +2

Query: 155 NVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKF 334
           N YSTN +  NLS   + +W      ++  +I  L        F  +L    V MK +K+
Sbjct: 7   NYYSTNYSKCNLSESFLASWKGVAYPTDIIQIFSL--PLQILAFFIILAKSPVQMKSMKW 64

Query: 335 KTNLEHEYIQNFKILQAGF 391
                H +   F ++   F
Sbjct: 65  PLFYNHLFCSIFDLILCTF 83


>Z81062-10|CAB02940.1|   79|Caenorhabditis elegans Hypothetical
           protein F15A4.10 protein.
          Length = 79

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 194 RHDMLAWVNDCLQSNFAKIEELC 262
           R D L W  D LQ N A+ +E+C
Sbjct: 31  RIDALLWEVDTLQKNIAETKEMC 53


>U39648-2|AAM15606.1|  166|Caenorhabditis elegans Hypothetical
           protein T13C5.7 protein.
          Length = 166

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = -1

Query: 426 SMGTILST-PIFLKPACNILKFCIYSCSKFVLNLILFIGTLPGNSMSMNWQ*AAPVHNSS 250
           ++G +L+  P     +C+ +  C  + +   L  ILF  TLPG S ++ W          
Sbjct: 86  ALGAVLALFPFVPAGSCSTIVVCPPTTT---LQYILFGTTLPGPSPAVAWCEETGPDAGK 142

Query: 249 IFAKFDWRQSFTHASISC 196
            +    W   F  AS++C
Sbjct: 143 WYTGVSWLLRFELASLAC 160


>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 387 VLKRWVWTR*YPLTNW*RVVSKI 455
           +LK+W+WTR    T W ++ S I
Sbjct: 178 ILKKWIWTRNSRFTVWVQLPSAI 200


>AF303270-1|AAG50228.1|   79|Caenorhabditis elegans 2M776 protein.
          Length = 79

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 194 RHDMLAWVNDCLQSNFAKIEELC 262
           R D L W  D LQ N A+ +E+C
Sbjct: 31  RIDALLWEVDTLQKNIAETKEMC 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,389,831
Number of Sequences: 27780
Number of extensions: 268223
Number of successful extensions: 669
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)