Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_I21
(444 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 25 0.37
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 25 0.37
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 1.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.0
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 2.6
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 3.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 3.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 3.5
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 6.1
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 6.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 6.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 8.0
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 25.0 bits (52), Expect = 0.37
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 157 FLRRAEHCMGKVAEAPESPVSKCVSSMSPIVV 62
+LRR C + EAP PV + + S++P+V+
Sbjct: 47 YLRRQLKCA--LGEAPCDPVGRRLKSLAPLVL 76
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 25.0 bits (52), Expect = 0.37
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 157 FLRRAEHCMGKVAEAPESPVSKCVSSMSPIVV 62
+LRR C + EAP PV + + S++P+V+
Sbjct: 47 YLRRQLKCA--LGEAPCDPVGRRLKSLAPLVL 76
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.0 bits (47), Expect = 1.5
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 258 DIFNGKKYEDIC 293
D+ N +KYED+C
Sbjct: 597 DLSNERKYEDVC 608
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 2.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 19 PVGHISFLTVVKFKTQQWVTSKTHTLRPETPGPQ 120
P+ H S+ ++ T H PETPGPQ
Sbjct: 447 PLAHSSYPAAIQIGH----TPHHHPHPPETPGPQ 476
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 2.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 223 FPVLDVDISTILHGR 179
FPVL V I+ +LHG+
Sbjct: 8 FPVLFVIINVLLHGQ 22
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +1
Query: 202 CPHPKPESTATLKFTWLGLISSMVKSM 282
CP P TWLG ++S + +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +1
Query: 202 CPHPKPESTATLKFTWLGLISSMVKSM 282
CP P TWLG ++S + +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +1
Query: 202 CPHPKPESTATLKFTWLGLISSMVKSM 282
CP P TWLG ++S + +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.0 bits (42), Expect = 6.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 279 YEDICPSTHNMDV 317
YE PSTH MD+
Sbjct: 46 YERFSPSTHLMDL 58
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.0 bits (42), Expect = 6.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 258 DIFNGKKYEDICPSTH 305
+I NGKK +I TH
Sbjct: 44 EIINGKKLTEIINETH 59
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 6.1
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 439 VPRSPSGILRSSRRSPLS 386
VP+S +G+ SSRRS ++
Sbjct: 239 VPKSVAGLNVSSRRSDMN 256
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 8.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +1
Query: 100 PETPGPQPPSPCNVRP 147
P P P PP P + P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,828
Number of Sequences: 438
Number of extensions: 3600
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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