Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_I15
(646 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 185 2e-47
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 184 5e-47
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.11
03_05_0366 - 23505755-23506441 31 0.78
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 30 1.8
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 30 1.8
11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509... 29 2.4
08_02_1278 - 25838146-25839411 29 3.2
06_01_0017 + 189346-189561,189614-189905,190024-190043 29 4.2
04_01_0588 + 7657510-7657992,7658397-7658843 29 4.2
02_04_0457 + 23093020-23093343,23093798-23093806 29 4.2
11_04_0441 + 17781533-17781775,17782007-17782114,17782386-177824... 28 7.3
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 7.3
05_03_0419 - 13707843-13707860,13707936-13708010,13708251-137082... 28 7.3
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 28 7.3
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022... 27 9.7
12_02_0488 + 19587337-19587648,19587739-19587798,19587876-195879... 27 9.7
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 27 9.7
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 27 9.7
07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312 27 9.7
01_01_0878 + 6888459-6889227,6890498-6890523,6891679-6891843,689... 27 9.7
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 185 bits (451), Expect = 2e-47
Identities = 85/140 (60%), Positives = 97/140 (69%)
Frame = +2
Query: 185 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 364
VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31 VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90
Query: 365 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 544
+GQGAFGNMCRGGRMFAPTK WR+WH ARGH IE
Sbjct: 91 AGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIET 150
Query: 545 IPELPLVVADKVQEINKTKQ 604
+PELPLV++D + I KT Q
Sbjct: 151 VPELPLVISDSAESIEKTSQ 170
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 184 bits (448), Expect = 5e-47
Identities = 86/143 (60%), Positives = 97/143 (67%)
Frame = +2
Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 355
+P V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGG
Sbjct: 27 MPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGG 86
Query: 356 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 535
THR+GQGAFGNMCRGGRMFAPTK WRRWH ARGH
Sbjct: 87 THRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHR 146
Query: 536 IEKIPELPLVVADKVQEINKTKQ 604
IE +PE PLVV+D ++ I KT Q
Sbjct: 147 IEGVPEFPLVVSDSIESIEKTAQ 169
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 296 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 406
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>03_05_0366 - 23505755-23506441
Length = 228
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 182 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 358
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 359 HRSGQGA 379
+ + + A
Sbjct: 168 NDNDEEA 174
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 401 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 294
HH + H + YE+ + H + RQ QY QH
Sbjct: 150 HHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQH 185
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -3
Query: 374 PDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 273
P + +HHHGH + Q H G PP
Sbjct: 33 PQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPP 66
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3
Query: 371 DRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 273
D +HHH H G H Q QH PP
Sbjct: 32 DPQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPP 64
>11_04_0439 +
17749634-17749858,17750164-17750301,17750770-17750943,
17751099-17751184,17751264-17751525,17751616-17751815,
17753631-17754086,17754198-17754474,17754694-17754828,
17754946-17755026,17756305-17756400,17756676-17756771,
17756844-17756900,17756975-17757043,17757158-17757237,
17758185-17758329,17758422-17758511,17758914-17758994,
17759103-17759198,17759279-17759335,17759417-17759461,
17759547-17759612,17760304-17760350,17762771-17762865,
17763375-17763393,17763438-17763498,17763637-17763660
Length = 1085
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 641 DHALRRLREDDSPVWSC*SPGLCR 570
D +++ L EDDS VWS PG CR
Sbjct: 715 DESVQELVEDDSEVWSA-LPGFCR 737
>08_02_1278 - 25838146-25839411
Length = 421
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 604 LFGLVDLLDFVGYNQGKLGNLFNNVSSSL 518
LF L+D+LD V +G+L LF+ S++L
Sbjct: 96 LFRLLDMLDAVARERGRLDELFSGESATL 124
>06_01_0017 + 189346-189561,189614-189905,190024-190043
Length = 175
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -1
Query: 538 NNVSSSLNERWDAGSSNGCRQGR--SPLSEVDATVPTP 431
N+ +S L+ +WDAGS + SPLS V A P
Sbjct: 103 NDSTSKLSFKWDAGSCSSASSSAMYSPLSAVSAPAKAP 140
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +2
Query: 218 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 388
+D+ ++ SR + + ++S+ W G R+ + GGG R G
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260
Query: 389 MCRGGRMFAPTKPWRRW 439
P PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 281 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 385
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>11_04_0441 +
17781533-17781775,17782007-17782114,17782386-17782471,
17782546-17782807,17782921-17783120,17783770-17784012,
17784118-17784394,17784625-17784759,17784880-17784960,
17785311-17785406,17785661-17785756,17785834-17785890,
17785967-17786035,17786154-17786240,17786534-17786635,
17786730-17786819,17786900-17786980,17787573-17787653,
17787761-17787856,17787937-17787993,17788093-17788137,
17788218-17788346
Length = 906
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 641 DHALRRLREDDSPVWSC*SPGLCR 570
D +++ L +DDS VWS PG CR
Sbjct: 582 DESVQELVDDDSEVWSA-LPGCCR 604
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 422 SWGRTYVHHDTCYRRHPDRTYEYHH 348
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>05_03_0419 -
13707843-13707860,13707936-13708010,13708251-13708286,
13709718-13709765,13710246-13710326,13710503-13710554,
13710671-13710730,13711266-13711346,13711461-13711577,
13711714-13711754,13711981-13712059,13712136-13712292,
13712586-13712718,13712799-13712926,13715152-13715314
Length = 422
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -1
Query: 298 STGLVTSLLAHAVGLPRVLGHRNVNIIDQVRTD-GRLEHEREGLG 167
+TG+ +L+ + VG+P+VL ++ I Q+ D G +E +RE G
Sbjct: 204 ATGVYKTLVRYLVGVPQVL----LDFIRQINDDNGPMEEQRERYG 244
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 365 TYEYHH-HGHAEFGRQHVQYPMIQH 294
T+++HH HGH FGR H +P H
Sbjct: 144 THDHHHGHGHHLFGRDH--WPASHH 166
>12_02_1229 +
27197464-27197481,27200438-27201583,27201935-27202201,
27202849-27202882,27202997-27203100,27203174-27203308,
27203367-27203511,27203864-27203880
Length = 621
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 217 DQVRTDGRLEHEREGLGCXPAPSHSSLSTPTLKVGLPIDSFRY 89
D+V +DG+ + + P+ SH L +P+ GLP D+ +
Sbjct: 386 DRVPSDGKAQGSQHVRPMSPSSSHLILISPSHAFGLPNDAVAF 428
>12_02_0488 +
19587337-19587648,19587739-19587798,19587876-19587941,
19588017-19588082,19588253-19588345
Length = 198
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 191 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 304
K ++ D N++ + SK R VSK H SAES
Sbjct: 80 KRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAES 117
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 185 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA---VARIPRVRGGG 355
VF PIR D+V+ V +K + ++ +Q GTGRA R P+ RGG
Sbjct: 160 VFDVPIRKDIVHRVGTHSTKTISEVSGTGRKPYNQK-----GTGRARHGTLRGPQFRGGA 214
Query: 356 T 358
T
Sbjct: 215 T 215
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +2
Query: 275 EAGHQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGRMFAPTKP-WR 433
E G ++ G++V + + R+R H G G+ G++ + GG+M P P WR
Sbjct: 74 EGGGSDKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGKMLRPGFPKWR 132
>07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312
Length = 133
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 337 RNSGDSTSSTP*FSTG--LVTSLLAHAVGLPRVLGHRNVNIIDQV 209
R+SG T F+ L + H +G+ VLG +N+ ++DQ+
Sbjct: 87 RDSGLQTGDPAGFTLADTLACGAVGHIMGVGVVLGLKNIGVLDQI 131
>01_01_0878 +
6888459-6889227,6890498-6890523,6891679-6891843,
6892415-6892494,6893001-6893154,6893808-6893864,
6894103-6894170,6894238-6894344,6894475-6894542,
6894885-6895007
Length = 538
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 415 PHEALAALAPSRQPPTAESGLGGSRCCYR 501
P A A AP+ P A+ G GG C R
Sbjct: 15 PAAAAGAAAPTTPPAAADGGAGGESCSPR 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,798,083
Number of Sequences: 37544
Number of extensions: 418796
Number of successful extensions: 1598
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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