Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_I15
(646 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 196 3e-50
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 196 3e-50
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 196 3e-50
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 196 3e-50
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 147 1e-35
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 32 0.77
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 32 0.77
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 32 0.77
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 32 0.77
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 32 0.77
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 32 0.77
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 32 0.77
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 31 1.3
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 31 1.3
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.8
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.8
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.8
DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856 pro... 30 2.3
Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma pigm... 28 9.4
BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p pro... 28 9.4
AF209743-1|AAF24766.1| 1293|Drosophila melanogaster XPC-like pro... 28 9.4
AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA... 28 9.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 196 bits (477), Expect = 3e-50
Identities = 90/143 (62%), Positives = 106/143 (74%)
Frame = +2
Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 355
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 356 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 535
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 536 IEKIPELPLVVADKVQEINKTKQ 604
I+ + E PLVV+D+VQ++ KTKQ
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQ 169
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 97 MSLSVARPLVSVYSEKSE 150
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 196 bits (477), Expect = 3e-50
Identities = 90/143 (62%), Positives = 106/143 (74%)
Frame = +2
Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 355
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 356 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 535
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 536 IEKIPELPLVVADKVQEINKTKQ 604
I+ + E PLVV+D+VQ++ KTKQ
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQ 169
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 97 MSLSVARPLVSVYSEKSE 150
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 196 bits (477), Expect = 3e-50
Identities = 90/143 (62%), Positives = 106/143 (74%)
Frame = +2
Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 355
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 356 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 535
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 536 IEKIPELPLVVADKVQEINKTKQ 604
I+ + E PLVV+D+VQ++ KTKQ
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQ 169
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 97 MSLSVARPLVSVYSEKSE 150
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 196 bits (477), Expect = 3e-50
Identities = 90/143 (62%), Positives = 106/143 (74%)
Frame = +2
Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 355
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 356 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 535
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 536 IEKIPELPLVVADKVQEINKTKQ 604
I+ + E PLVV+D+VQ++ KTKQ
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQ 169
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 97 MSLSVARPLVSVYSEKSE 150
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 147 bits (357), Expect = 1e-35
Identities = 67/107 (62%), Positives = 77/107 (71%)
Frame = +2
Query: 284 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 463
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 464 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQ 604
Q++GH+I+ + E PLVV+D+VQ++ KTKQ
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQ 107
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 31.9 bits (69), Expect = 0.77
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +2
Query: 179 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 358
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 359 HRSGQGAFGNMCRGGRM 409
+GQGA G GG M
Sbjct: 287 AAAGQGAAGG--AGGLM 301
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 31.9 bits (69), Expect = 0.77
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +2
Query: 179 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 358
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 359 HRSGQGAFGNMCRGGRM 409
+GQGA G GG M
Sbjct: 287 AAAGQGAAGG--AGGLM 301
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 31.9 bits (69), Expect = 0.77
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +2
Query: 179 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 358
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 359 HRSGQGAFGNMCRGGRM 409
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 31.9 bits (69), Expect = 0.77
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +2
Query: 179 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 358
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 359 HRSGQGAFGNMCRGGRM 409
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 31.9 bits (69), Expect = 0.77
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +2
Query: 179 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 358
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 359 HRSGQGAFGNMCRGGRM 409
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 31.9 bits (69), Expect = 0.77
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +2
Query: 179 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 358
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 359 HRSGQGAFGNMCRGGRM 409
+GQGA G GG M
Sbjct: 287 AAAGQGAAGG--AGGLM 301
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 31.9 bits (69), Expect = 0.77
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +2
Query: 179 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 358
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 359 HRSGQGAFGNMCRGGRM 409
+GQGA G GG M
Sbjct: 287 AAAGQGAAGG--AGGLM 301
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 404 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 273
+ TC R P + H H H H +P H G+QPP
Sbjct: 1010 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 1052
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 404 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 273
+ TC R P + H H H H +P H G+QPP
Sbjct: 209 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 251
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 316 TCCRP-NSACPWWWYS*VRSGC 378
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 316 TCCRP-NSACPWWWYS*VRSGC 378
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 316 TCCRP-NSACPWWWYS*VRSGC 378
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856
protein.
Length = 265
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 571 GYNQGKLGNLFNNVSSSLNERWDAGSSNGCRQGR 470
GYN+G+ GN +N +++ N + G G QGR
Sbjct: 200 GYNRGRNGNNYNRGNNNSNNYNNRGGRRGRNQGR 233
>Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma
pigmentosum group Ccomplementing factor protein.
Length = 1293
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 430 AALAPSRQPPTAESGLGGSRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGL 609
+A+A R A SG+ GS R+P+ +S R+ R P SP QQ+ T
Sbjct: 56 SAVAGKRGDHKAPSGIKGSSVKKRKPTGQS-LRSKLYNKYRPPPKTFPTSPSQQQENTPR 114
Query: 610 SSSLRRLK 633
+S + K
Sbjct: 115 ASGSKNAK 122
>BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p
protein.
Length = 498
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -1
Query: 604 LFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDAGSSN-GCRQGRSPLSEVDATVPTPP 428
L GL+ + N K +LF S ++R N GC +PL + V TPP
Sbjct: 395 LVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPP 454
Query: 427 G 425
G
Sbjct: 455 G 455
>AF209743-1|AAF24766.1| 1293|Drosophila melanogaster XPC-like
protein isoform a protein.
Length = 1293
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 430 AALAPSRQPPTAESGLGGSRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGL 609
+A+A R A SG+ GS R+P+ +S R+ R P SP QQ+ T
Sbjct: 56 SAVAGKRGDHKAPSGIKGSSVKKRKPTGQS-LRSKLYNKYRPPPKTFPTSPSQQQENTPR 114
Query: 610 SSSLRRLK 633
+S + K
Sbjct: 115 ASGSKNAK 122
>AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA
protein.
Length = 537
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -1
Query: 604 LFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDAGSSN-GCRQGRSPLSEVDATVPTPP 428
L GL+ + N K +LF S ++R N GC +PL + V TPP
Sbjct: 434 LVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPP 493
Query: 427 G 425
G
Sbjct: 494 G 494
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,500,523
Number of Sequences: 53049
Number of extensions: 647612
Number of successful extensions: 4228
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4083
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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