Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_I13
         (351 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0661 - 16726958-16726966,16727133-16727234                       49   9e-07
01_02_0115 - 11248021-11248101,11249017-11249118                       49   9e-07
06_03_0336 + 19671500-19672150,19672681-19673301                       27   3.1  
08_01_0349 - 3082700-3083407                                           27   4.1  
08_02_0588 + 19036509-19039235                                         27   5.5  

>05_03_0661 - 16726958-16726966,16727133-16727234
          Length = 36

 Score = 49.2 bits (112), Expect = 9e-07
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +1

Query: 49  MAKSKNHTNHNQNRKAHRNGIKKPR 123
           MAKSKNHT HNQ+ KAH+NGIKKP+
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPK 25


>01_02_0115 - 11248021-11248101,11249017-11249118
          Length = 60

 Score = 49.2 bits (112), Expect = 9e-07
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +1

Query: 49  MAKSKNHTNHNQNRKAHRNGIKKPR 123
           MAKSKNHT HNQ+ KAH+NGIKKP+
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPK 25



 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +2

Query: 113 KSQGKTRHESTLGMDPKFLRNQRFCKKGNLK 205
           K   + R  ST GMDPKFLRNQR+ +K N K
Sbjct: 22  KKPKRHRQTSTKGMDPKFLRNQRYSRKHNKK 52


>06_03_0336 + 19671500-19672150,19672681-19673301
          Length = 423

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 148 WHGSKIFKESKVLQEG*PEASQATREGG 231
           WH    FK S+    G PEA+ A  EGG
Sbjct: 223 WHEINQFKSSEKSLVGMPEAAAAEEEGG 250


>08_01_0349 - 3082700-3083407
          Length = 235

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 138 SCLVXPWLFDTISVSFAVLVMICMIL*LCHFDAFSIHLDSED 13
           SC V  WLF  I +  A L M+C +  L  +  +    D ED
Sbjct: 180 SCPVFLWLFGPIPMFAACLAMVCALYFLDVYTEWDKADDEED 221


>08_02_0588 + 19036509-19039235
          Length = 908

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 220 ELLGWLQVTLLAKPLIP*KFWIHAKGGFVPG 128
           ELLGW QV   A  ++P +  + A   F PG
Sbjct: 423 ELLGWKQVLAQAANVLPKRRMVSATRRFPPG 453


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,176,155
Number of Sequences: 37544
Number of extensions: 120918
Number of successful extensions: 367
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)