Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_I03
(402 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein. 30 2.5
BT006844-1|AAP35490.1| 438|Homo sapiens granulin protein. 30 2.5
BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein. 30 2.5
BC000324-1|AAH00324.1| 438|Homo sapiens granulin protein. 30 2.5
AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth ... 30 2.5
AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein. 30 2.5
AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens ... 30 2.5
AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein. 30 2.5
BC008781-1|AAH08781.1| 205|Homo sapiens chromosome 8 open readi... 29 7.7
AB209451-1|BAD92688.1| 376|Homo sapiens bestrophin variant prot... 29 7.7
>X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 78 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 203
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BT006844-1|AAP35490.1| 438|Homo sapiens granulin protein.
Length = 438
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 78 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 203
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 393 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 438
>BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein.
Length = 593
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 78 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 203
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BC000324-1|AAH00324.1| 438|Homo sapiens granulin protein.
Length = 438
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 78 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 203
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 393 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 438
>AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth
factor protein.
Length = 593
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 78 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 203
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein.
Length = 593
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 78 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 203
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ13286 fis, clone OVARC1001154, highly similar to
Homo sapiens clone 24720 epithelin 1 and 2 mRNA. ).
Length = 413
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 78 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 203
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 368 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 413
>AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 78 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 203
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BC008781-1|AAH08781.1| 205|Homo sapiens chromosome 8 open reading
frame 32 protein.
Length = 205
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 268 KRSYHYLLSXSYFNNYQTNREGSRXSSGNYR 360
+R + + + SY N+ ++R + SSGN+R
Sbjct: 127 RRKFRVICADSYLKNFASDRSHMKDSSGNWR 157
>AB209451-1|BAD92688.1| 376|Homo sapiens bestrophin variant
protein.
Length = 376
Score = 28.7 bits (61), Expect = 7.7
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +3
Query: 213 QGQPRCSERTEGISLTVFETFLPLSPVGLLLQQLPDEQGRIPXLFRKLSDDSXEKNIGP 389
QG PR +E G+S LPL+P ++LP G P RKL + + +GP
Sbjct: 31 QGDPRVTEPL-GLSRLHARLCLPLAP-----ERLPGGLGARPARSRKLEEPRHRRALGP 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,674,311
Number of Sequences: 237096
Number of extensions: 1063440
Number of successful extensions: 2067
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2067
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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