Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_H24
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 32 0.41
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 32 0.41
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 32 0.41
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 2.9
Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical p... 28 6.7
Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 28 6.7
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 28 6.7
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 28 6.7
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 28 6.7
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 28 6.7
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 28 6.7
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 28 6.7
Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 28 6.7
AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical ... 28 6.7
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 28 6.7
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 181 PNTKEPPVT--PSHPAPMLGGELSLIPIEQL-IQVDDVKPRPS 300
P PP T P P+ G EL +PI Q+ +QV + PRP+
Sbjct: 645 PRAAPPPRTLAQGRPIPLNGKELKAVPIRQIPLQVRPLPPRPA 687
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 181 PNTKEPPVT--PSHPAPMLGGELSLIPIEQL-IQVDDVKPRPS 300
P PP T P P+ G EL +PI Q+ +QV + PRP+
Sbjct: 645 PRAAPPPRTLAQGRPIPLNGKELKAVPIRQIPLQVRPLPPRPA 687
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 181 PNTKEPPVT--PSHPAPMLGGELSLIPIEQL-IQVDDVKPRPS 300
P PP T P P+ G EL +PI Q+ +QV + PRP+
Sbjct: 645 PRAAPPPRTLAQGRPIPLNGKELKAVPIRQIPLQVRPLPPRPA 687
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 181 PNTKEPPVT--PSHPAPMLGGELSLIPIEQL-IQVDDVKPRPS 300
P PP T P P+ G EL +PI Q+ +QV + PRP+
Sbjct: 645 PRAAPPPRTLAQGRPIPLNGKELKAVPIRQIPLQVRPLPPRPA 687
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 181 PNTKEPPVT--PSHPAPMLGGELSLIPIEQL-IQVDDVKPRPS 300
P PP T P P+ G EL +PI Q+ +QV + PRP+
Sbjct: 645 PRAAPPPRTLAQGRPIPLNGKELKAVPIRQIPLQVRPLPPRPA 687
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +1
Query: 46 VKTTSPRYKSGRSRAKAALVKRVRSVAVFSL-GLKXXXXXXXXXXXPNTKEPPVTPSHPA 222
V T S R + RA ++R RS + +L + P+ + P T
Sbjct: 170 VLTNSYRCAKKKIRATFHAIRRSRSNSTATLQDVVLTSEGIRTVTTPSRRAPKATVYAKR 229
Query: 223 PMLGGELSLIPIEQLIQVDDVKPRPST*TGPK-VGHRRTPE 342
M +L LIP + I+ +DVK R S + G RTPE
Sbjct: 230 SMSVSDLLLIPDRRDIKNEDVKTRGSPVKKTRGTGRSRTPE 270
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +1
Query: 46 VKTTSPRYKSGRSRAKAALVKRVRSVAVFSL-GLKXXXXXXXXXXXPNTKEPPVTPSHPA 222
V T S R + RA ++R RS + +L + P+ + P T
Sbjct: 170 VLTNSYRCAKKKIRATFHAIRRSRSNSTATLQDVVLTSEGIRTVTTPSRRAPKATVYAKR 229
Query: 223 PMLGGELSLIPIEQLIQVDDVKPRPST*TGPK-VGHRRTPE 342
M +L LIP + I+ +DVK R S + G RTPE
Sbjct: 230 SMSVSDLLLIPDRRDIKNEDVKTRGSPVKKTRGTGRSRTPE 270
>Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical
protein C34E11.2 protein.
Length = 677
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +1
Query: 52 TTSPRYKSGRSRAKAALVKRVRSVAVFSLGLKXXXXXXXXXXXPNTKEPPVTPSHPAP 225
+T RYK GRS + +++V A+ LK EPP P PAP
Sbjct: 372 STQSRYKDGRSTS-SSVVSEHELAALARDELKETSEIREANAVSEDDEPPTNPPSPAP 428
>Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 472 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 506
>Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 472 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 506
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 472 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 506
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 482 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 516
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 486 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 520
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 544 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 578
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 502 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 536
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 510 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 544
>Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 472 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 506
>Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 472 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 506
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 472 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 506
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 482 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 516
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 486 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 520
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 544 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 578
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 502 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 536
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 510 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 544
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 448 NEVCFIYHKIDIYRHNPIQY*QHLRSYCNVFNATY 344
N V I K DI+ NP+ Y + +S CNV TY
Sbjct: 472 NTVMGILGKDDIFGENPLLYDEVGKSSCNVRALTY 506
>AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical
protein C15F1.5b protein.
Length = 311
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -1
Query: 344 CSGVRRCPTLGPVYVEGRGFTS-STCIN 264
C G R C GP + GR F C+N
Sbjct: 66 CCGARMCDVCGPKWTNGRDFCELGKCVN 93
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -1
Query: 344 CSGVRRCPTLGPVYVEGRGFTS-STCIN 264
C G R C GP + GR F C+N
Sbjct: 136 CCGARMCDVCGPKWTNGRDFCELGKCVN 163
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 357 SMRLMLWRSSVPNLRARLRGRSRLYIINLYQ 265
S+ L R SVPN++ +GR+R I LYQ
Sbjct: 1120 SLFARLVRLSVPNVQLDRQGRARAQIAELYQ 1150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,328,936
Number of Sequences: 27780
Number of extensions: 230879
Number of successful extensions: 654
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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