Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP12_F_H19
         (482 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...   161   2e-40
AL132848-1|CAB60388.2|  381|Caenorhabditis elegans Hypothetical ...    29   1.8  
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   5.4  
U39645-5|AAU05591.1|  345|Caenorhabditis elegans Hypothetical pr...    27   5.4  
U39645-4|AAU05592.1|  341|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    27   9.4  

>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score =  161 bits (391), Expect = 2e-40
 Identities = 73/124 (58%), Positives = 98/124 (79%)
 Frame = +2

Query: 86  IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 265
           +VKK+  +F RH+SDRY ++  +WRKP+GIDNRVRRRF+G   MP IG+GS+++TR +LP
Sbjct: 11  VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRRTRFVLP 70

Query: 266 NGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRXLIVERAXXLXIXVTNAAARLRS 445
           NG++KVLV NVK+L++L+MQ+ KY  EI HGVS+K R  IVERA  L I +TN  ARLR+
Sbjct: 71  NGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIKLTNGNARLRT 130

Query: 446 XENE 457
            E+E
Sbjct: 131 EESE 134


>AL132848-1|CAB60388.2|  381|Caenorhabditis elegans Hypothetical
           protein Y47H10A.2 protein.
          Length = 381

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2

Query: 206 QYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQN 328
           QYLM NI        R   P+GF K L+  +  L+I   QN
Sbjct: 213 QYLMNNIDLKYGLLIRCWHPSGFDKELLSGIPRLDIFYAQN 253


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
            K07G5.3 protein.
          Length = 1202

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -2

Query: 199  ESPADSVVN-TSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLVCFFKKRD 29
            E P +S+   T R++ +P  +++ +R+  ++ ++  FD+ R       HLV   + R+
Sbjct: 1058 EEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLVAARQLRE 1115


>U39645-5|AAU05591.1|  345|Caenorhabditis elegans Hypothetical
           protein C14F11.4a protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 74  YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 247
           Y P + KK    +RFI   ++R+D + RN   P     R  +  + Q L+ +  Y S+ +
Sbjct: 4   YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60

Query: 248 TRHML 262
             + L
Sbjct: 61  AEYQL 65


>U39645-4|AAU05592.1|  341|Caenorhabditis elegans Hypothetical
           protein C14F11.4b protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 74  YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 247
           Y P + KK    +RFI   ++R+D + RN   P     R  +  + Q L+ +  Y S+ +
Sbjct: 4   YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60

Query: 248 TRHML 262
             + L
Sbjct: 61  AEYQL 65


>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 52  QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 156
           QD  K   + D+RQKE  E Y+  IGS+ +  E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 41  KETYKMAIRPVYRPTIVKKRTKR-FIRHQSDRYDKLKRNWRKPRGIDNRVRRR 196
           K+ +  A++P +R TI+ +R K   ++   DRY K K+ + K   +    +RR
Sbjct: 387 KKKHMTALKP-WRDTILIERGKMPKLKKIRDRYIKQKKKFNKENRLSKECKRR 438


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,128,074
Number of Sequences: 27780
Number of extensions: 197454
Number of successful extensions: 505
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)