Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP12_F_H16
(491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 116 7e-27
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 116 7e-27
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 92 2e-19
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 92 2e-19
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 92 2e-19
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 92 2e-19
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 92 2e-19
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 63 9e-11
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 58 5e-09
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 36 0.021
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 35 0.028
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 32 0.26
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 31 0.60
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 29 1.4
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 29 1.4
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 2.4
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 2.4
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 2.4
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 28 3.2
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.2
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 4.2
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical pr... 27 9.8
U23528-8|AAK31386.2| 293|Caenorhabditis elegans Hypothetical pr... 27 9.8
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 27 9.8
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 116 bits (280), Expect = 7e-27
Identities = 57/124 (45%), Positives = 74/124 (59%)
Frame = +3
Query: 12 VKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNY 191
+K KI+A GIP +QRL +AG+QLED SD I E+T+++ Y
Sbjct: 24 IKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVY 79
Query: 192 STPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCH 371
+TP LAVL++YK+DENGKI RLR+EC CG GVFMA +RHYCG+CH
Sbjct: 80 TTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCH 139
Query: 372 STMV 383
T+V
Sbjct: 140 DTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 116 bits (280), Expect = 7e-27
Identities = 57/124 (45%), Positives = 74/124 (59%)
Frame = +3
Query: 12 VKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNY 191
+K KI+A GIP +QRL +AG+QLED SD I E+T+++ Y
Sbjct: 24 IKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVY 79
Query: 192 STPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCH 371
+TP LAVL++YK+DENGKI RLR+EC CG GVFMA +RHYCG+CH
Sbjct: 80 TTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCH 139
Query: 372 STMV 383
T+V
Sbjct: 140 DTLV 143
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 99 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 175 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAG 77
IE+VKAKIQ K GIPP+QQRLIFAG
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 99 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 175 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 99 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 175 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 251 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 327 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 403 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 479 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 555 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 631 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 707 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 91.1 bits (216), Expect = 4e-19
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 783 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
IE+VKAKIQ K GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 63.3 bits (147), Expect = 9e-11
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
+E +K K++ K GIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 23 VERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
+E +K K+Q K G+PP+QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 183 VETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 87 EDGRTLSDYNIQKESTLHL 143
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 12 VKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 137
+K I+ + IP + L F+GK+LED ++ DYNIQK ST+
Sbjct: 178 IKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 35.5 bits (78), Expect = 0.021
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 143
I VK I + + + R++ K LED TL+ YNIQ+ STL L
Sbjct: 195 IRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 35.1 bits (77), Expect = 0.028
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 143
I H+K +I + + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 218 IRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDY 113
+E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 165 VEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 31.9 bits (69), Expect = 0.26
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 137
I +K +I + GI R K LED TL+ YNI++ ST+
Sbjct: 184 IRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 30.7 bits (66), Expect = 0.60
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 12 VKAKIQAKXGIPPNQQRLIFAGKQLE---DGRTLSDYNIQKESTLHL 143
VKAKI K I PN Q+L+ L+ D TL D + + STL L
Sbjct: 127 VKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTLRL 173
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 143
+ +K +IQ + G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 599 MSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 143
+ +K +IQ + G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 599 MSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -1
Query: 488 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 342
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -1
Query: 488 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 342
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -1
Query: 488 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 342
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 12 VKAKIQAKXGIPPNQQRLIFAGK 80
+K KI+A GIP +QRL +A +
Sbjct: 24 IKQKIEAAEGIPAEEQRLCYAAR 46
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRA 1281
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRA 1281
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 150 STPGGGWIPSGYCSPRGYVHLPAA 79
S PGG +PSG +G +H+P A
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRA 1373
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 5.6
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 63 LIFAGKQLEDGRTLSDYNIQKESTLHL 143
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 12 VKAKIQAKXGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 137
+K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 47 LKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical
protein K08C9.7 protein.
Length = 154
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 246 RFYKVDENGKIHRL 287
+++K+DENGKI RL
Sbjct: 111 KYFKIDENGKISRL 124
>Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical
protein F34H10.1 protein.
Length = 142
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 246 RFYKVDENGKIHRL 287
+++K+DENGKI RL
Sbjct: 99 KYFKIDENGKISRL 112
>U23528-8|AAK31386.2| 293|Caenorhabditis elegans Hypothetical
protein B0034.5 protein.
Length = 293
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 289 RRRWILPFSSTL*NLRTASLTFFFLCLIFL 200
RRR+ L S N+R A+ T F+C+I+L
Sbjct: 178 RRRFSLRMQSRT-NVRQATATMLFICVIYL 206
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 3 IEHVKAKIQAKXGIP 47
IE+VKAKIQ K GIP
Sbjct: 23 IENVKAKIQDKEGIP 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,367,777
Number of Sequences: 27780
Number of extensions: 189110
Number of successful extensions: 574
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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